Gene Smed_5421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5421 
Symbol 
ID5319723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp384289 
End bp384495 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content54% 
IMG OID640777187 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001314119 
Protein GI150377524 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.14942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.64967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG GTACGGTAAA ATGGTTCAAC GCAACAAAGG GCTTTGGCTT CATCCAGCCG 
GACGACGGCA GCCCCGATGT TTTCGTACAC ATCTCTGCAG TGGAGCGCGC CGGCCTGCAG
GATCTGAAGG ATGGTCAGAA GATTACCTAT GAGCTGGTAA AGGATCGTAA GTCCGGCAAG
ATGTCGGCTG ATAATTTACG GGCCTAG
 
Protein sequence
MATGTVKWFN ATKGFGFIQP DDGSPDVFVH ISAVERAGLQ DLKDGQKITY ELVKDRKSGK 
MSADNLRA