| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5414 |
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| Symbol | |
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| ID | 5319716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 378285 |
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| End bp | 379172 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777180 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314112 |
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| Protein GI | 150377517 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.42118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.729214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG CCATGAAAGC TGACATTCTA AAGGGGCTGA AAAAGCCTCC TCTTGGACCG
GTTTTGACCG CGTCCAAGAT CCTGCTGGCC AGCTATATAC TGCTCGCCAT TGCGGCACCG
GCGATCGCTC CGCAAAATCC CTACGATCCC TTGCAGATAT ATGGATGGGA AGCATCCTCC
CCGCCGGGAA CCATGGGCGG CGGCGGTTTT CGCTACCTGC TCGGTACCGA CGGGCTCGGC
AGAGATATCG TCAGCACCAT TCTTTACGGC CTGCGGATCA GCCTCATGGT GTCGGTCACG
AGCGCCGCGA TCGCCGCCCT GATCGGGCTT ACCGCCGGTG TCAGTGCCGC CTATTTCGGC
AAGTGGGTCG ACGCCGCGAT CATGCGGCTC GTCGACCTTC AGCTCAGCCT GCCGACCATA
CTCATCGCCC TGATCGCCAT TGTGACGCTT GGGCCGGGCA TCGACCGGAT CATTCTGGCC
CTGATCATCG CGCAATGGGC AACCTATGCG CGGATCGCGC GCAGCGTGGC GCTAAGCGAG
ACGAACAAGT CCTATATCGA CGCCGCCCGA CTGATGCGGC TGCCAACCGC ACGCATCATC
TTTCGCCACC TGCTGCCAAA CAGCATCGCA CCGGCCGTGA CCTTGATTCC GATCGAAGTC
GGTCATGCCG TCGCACTCGA AGCGACCTTG TCCTTTCTCG GGCTTGGCGT GCCGATCGAC
AAGCCGTCGC TCGGCTCCGC GGTTGCAAAC GGCTTTCAGT ATCTGCTGAC CGGCCAGTAC
TGGATCAGCC TTTTTCCTGG CCTCGCTCTG TTCGGCCTGA TCGCAAGCAT CAATCTCGTC
GGCGAAGACG TCCGGCGCAG TCTCGATCCA AGGAACCATC CGGCATGA
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| Protein sequence | MKPAMKADIL KGLKKPPLGP VLTASKILLA SYILLAIAAP AIAPQNPYDP LQIYGWEASS
PPGTMGGGGF RYLLGTDGLG RDIVSTILYG LRISLMVSVT SAAIAALIGL TAGVSAAYFG
KWVDAAIMRL VDLQLSLPTI LIALIAIVTL GPGIDRIILA LIIAQWATYA RIARSVALSE
TNKSYIDAAR LMRLPTARII FRHLLPNSIA PAVTLIPIEV GHAVALEATL SFLGLGVPID
KPSLGSAVAN GFQYLLTGQY WISLFPGLAL FGLIASINLV GEDVRRSLDP RNHPA
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