Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5409 |
Symbol | |
ID | 5319711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 372115 |
End bp | 372897 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640777175 |
Product | hypothetical protein |
Protein accession | YP_001314107 |
Protein GI | 150377512 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4227] Antirestriction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.861263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.17576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGCA TCAACGACAC TTACCAACGC ATCACTGATA CCATCGTAAA GCAGCTTGAA GCCGGCACAA AACCGTGGAT CCGTCCCTGG CGCAACGACA TCCGCTGCTC ACTCACCCCG CGCCGCGCCA CCGGCGAAGC CTATCGGGGC ATCAACGTCC TGATGCTGTG GATCTCCAGC CAGATTTTCG GCTACGAGGA AAACACCTGG ATGACCTATC GGCAGGCCCA GGATCTCGGC GCGAAAGTCC GAAAGGGTGA GAAAGGAACG CTCGTCGTCA AGTACGGAAC CTTCACGCCG AAGGAGCGCG AAGACGACGA GGATTGTTCA ATCCCTTATC TCAAAGGATA CACCGTCTTC AATGTCGAGC AGATCAAGAA CCTGCCTGCC CGGTTTTTCA GCCCGGCCGA TGAGTTACCG AGGGCTCCGG TCCCGCACAT TGAGACCGTT GAAACATTCG TCAAAAACAC CGGCGCCAGT GTCACCTACG GCGGCACCAA AGCATGCTAC CGGCCGAACT GCGACGACAT TCTGATGCCG GACCGGCACC GGTTCGACAG CCAGGTCCAT CTATATTCGA CCTTGCTCCA CGAAATTGGC CATTATGCCG TAAGCCGGAT TATGCCGCAT GGCCGATTAT CAAGGCGGCG GCGCCTCCAT TCGGCCATGC GGCGGTTCGG CATAATCAGA GCGATTCAAG GAACACAAGC AGTTCGTCGT TGGGACGATA CCGCCCAGGA TGGGCTTCTG GTCTGGCGAC CTGAGAGAGC GCCTTTTCCT TGA
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Protein sequence | MQSINDTYQR ITDTIVKQLE AGTKPWIRPW RNDIRCSLTP RRATGEAYRG INVLMLWISS QIFGYEENTW MTYRQAQDLG AKVRKGEKGT LVVKYGTFTP KEREDDEDCS IPYLKGYTVF NVEQIKNLPA RFFSPADELP RAPVPHIETV ETFVKNTGAS VTYGGTKACY RPNCDDILMP DRHRFDSQVH LYSTLLHEIG HYAVSRIMPH GRLSRRRRLH SAMRRFGIIR AIQGTQAVRR WDDTAQDGLL VWRPERAPFP
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