Gene Smed_5398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5398 
Symbol 
ID5319700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp363688 
End bp364155 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content54% 
IMG OID640777167 
ProductWGR domain-containing protein 
Protein accessionYP_001314099 
Protein GI150377504 
COG category[S] Function unknown 
COG ID[COG3831] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.87567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCATA AGTGTCGTGG ACGTAACCGC CGGGATCAAC GATTCTCATC GCATGATGTC 
AAACCGATTA CCTCAATTGA ACGCCTAGAT GCTACCAAGA ATATTGCACG CTACTATGCA
TTTCGCTTGA ACCAAACCTG TTCGGCGACT CTTGCGGAAT TGGGCAGGAT TGGAGCGAAG
GGACAGATGA TGGTTCATCA CTTCGGCCGA GAGGAGGAAG CGGTTCGATT GTTTCTGGAT
CCCCGCCGAA AGAAGCGGCG GCCCGGCTTT CGTCCTCCGA CCATGAAATT GGATTGGGGG
AGAACCTGCA AGTCCCCTCC CACACCCCCG TATGTACACT TTCGTTCCAG GCGTCCTAAG
AGGTGGCCTG CCCTGCCCTC TTGGAAGAAG GGTTCGCGCT CGATCCTGCC CTTCTGTTCG
GCCATGGTGA TAATCAGCTC GGCCGGGGCC AGTTCAAACC AGACTTGA
 
Protein sequence
MIHKCRGRNR RDQRFSSHDV KPITSIERLD ATKNIARYYA FRLNQTCSAT LAELGRIGAK 
GQMMVHHFGR EEEAVRLFLD PRRKKRRPGF RPPTMKLDWG RTCKSPPTPP YVHFRSRRPK
RWPALPSWKK GSRSILPFCS AMVIISSAGA SSNQT