Gene Smed_5397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5397 
Symbol 
ID5319699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp362653 
End bp363564 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content57% 
IMG OID640777166 
Producthypothetical protein 
Protein accessionYP_001314098 
Protein GI150377503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.938247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC TCGAGAAGAT ACGCGATCTC GACGTAGAGG CGGACTCCCC TCGCCCCGTA 
CACTTAAGCG CCGCTAGCGG GCTCGTTTGC CACGAAGCGG CAATGTATGT GATTACGGAT
GACGACCTGC ACCTTGGTGT CTTTCCCGTT CGTAGTTCCG GACCAGGTGG ATTGATCCGC
TTGTTTGACG GCGTCTTGCC CCAGTCGCAT GACGAGCGGA AGGAACAGAA GCCCGACCTG
GAAGCACTTA CCCTCATTCC CCCTTACAGT GATCTTTCTT TTGGCGCTCT CCTCGCCATT
GGTTCAGGAT CAAGGTCCAA TCGAAAAAGG GGTGTCTTGC TCGGGCTCGA CGCGTGCGGC
ACCGTATGCA CCGCTCCAAG AATTGTCGAC CTCTCATTCA TTCTTGATCC GCTCGCGGCG
GAATTTCCTC AGGTCAATAT TGAAGGTGCG GTCGTGGCTG GACAGGAGCT GCGGTTGTTT
CAGCGTGGCA ACAAGCGGCA TATCGACAAT GCCGTCATTC GTTACTCGCT TTCGGCGGTT
TTGGACGGTC TTGATAGCGA GCGAGCCAAT TCCATGACGC CGATTGCGAT CGAGCGGTTC
GATCTCGGTA CCATCCGAGG AACTCCGTTC GGGTTCACGG ATGCCGCGGC ATTATCCAAT
GGAGACATGG TCTTCAGCGC GGTGGCGGAG GACACAGAGG ATGCATTTCA TGACGGCCCC
TGTGTCGGCG CTGGCATCGG TATCATCGAT GACCGTGGTC GTCTCCTTTC TTTTGACCGG
ATCGAAGGGA CACACAAGGT AGAGGGCATT CACGCGCGGC TCCAAGGTGA GGTCCTGGAG
CTTCTGCTCG TGACCGATGC CGACAGCCGC GAAGTCCCGG CAACGCTATT TTCGGCGTGC
ATTTCCCGAT AG
 
Protein sequence
MIKLEKIRDL DVEADSPRPV HLSAASGLVC HEAAMYVITD DDLHLGVFPV RSSGPGGLIR 
LFDGVLPQSH DERKEQKPDL EALTLIPPYS DLSFGALLAI GSGSRSNRKR GVLLGLDACG
TVCTAPRIVD LSFILDPLAA EFPQVNIEGA VVAGQELRLF QRGNKRHIDN AVIRYSLSAV
LDGLDSERAN SMTPIAIERF DLGTIRGTPF GFTDAAALSN GDMVFSAVAE DTEDAFHDGP
CVGAGIGIID DRGRLLSFDR IEGTHKVEGI HARLQGEVLE LLLVTDADSR EVPATLFSAC
ISR