Gene Smed_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5385 
Symbol 
ID5319687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp350308 
End bp350748 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content61% 
IMG OID640777155 
Productconjugal transfer protein TrbH 
Protein accessionYP_001314087 
Protein GI150377492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0559589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATC TTCTTTCGAC TGTGATTGCC GCCGCGCTTT TGTCTGGTTG TCAAACGGCG 
GATCAGGGCT TGCGTCCCAG CTCAGATGCG GGAGCAGTCA CCGGACCGGC CGCGAGCGCC
ATCGCCGGCG ACATGGTGAG CCGTCTTGCC GAGCAAATCG GCCCTGCCAC AGCTACGACA
ACAATCAGAA TGGACAAGGA TACCTCCGAG TTCGCGATAG CCCTCGAAGC AGCCTTAAAG
GGGTGGGGCT ACACGGTCGT CACCGACAAG AAATTGGTCA GGGGCATCAA GCCCGTCGAG
CTTGCATATG CAGCCGAGAG CTTCGACGGA CAGATTCTGG CTCGACTCTC GACGCCTTCC
ATTGCGTTCG GGCGAGCTTA CACGCCGACT GGGGCCGGCG CCATGCCCGC TAGTCCGCTG
TCGATCTTGC AGCGCAACTG A
 
Protein sequence
MQNLLSTVIA AALLSGCQTA DQGLRPSSDA GAVTGPAASA IAGDMVSRLA EQIGPATATT 
TIRMDKDTSE FAIALEAALK GWGYTVVTDK KLVRGIKPVE LAYAAESFDG QILARLSTPS
IAFGRAYTPT GAGAMPASPL SILQRN