Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5385 |
Symbol | |
ID | 5319687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 350308 |
End bp | 350748 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777155 |
Product | conjugal transfer protein TrbH |
Protein accession | YP_001314087 |
Protein GI | 150377492 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0559589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATC TTCTTTCGAC TGTGATTGCC GCCGCGCTTT TGTCTGGTTG TCAAACGGCG GATCAGGGCT TGCGTCCCAG CTCAGATGCG GGAGCAGTCA CCGGACCGGC CGCGAGCGCC ATCGCCGGCG ACATGGTGAG CCGTCTTGCC GAGCAAATCG GCCCTGCCAC AGCTACGACA ACAATCAGAA TGGACAAGGA TACCTCCGAG TTCGCGATAG CCCTCGAAGC AGCCTTAAAG GGGTGGGGCT ACACGGTCGT CACCGACAAG AAATTGGTCA GGGGCATCAA GCCCGTCGAG CTTGCATATG CAGCCGAGAG CTTCGACGGA CAGATTCTGG CTCGACTCTC GACGCCTTCC ATTGCGTTCG GGCGAGCTTA CACGCCGACT GGGGCCGGCG CCATGCCCGC TAGTCCGCTG TCGATCTTGC AGCGCAACTG A
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Protein sequence | MQNLLSTVIA AALLSGCQTA DQGLRPSSDA GAVTGPAASA IAGDMVSRLA EQIGPATATT TIRMDKDTSE FAIALEAALK GWGYTVVTDK KLVRGIKPVE LAYAAESFDG QILARLSTPS IAFGRAYTPT GAGAMPASPL SILQRN
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