| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5384 |
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| Symbol | |
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| ID | 5319686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 349492 |
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| End bp | 350304 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777154 |
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| Product | conjugal transfer protein TrbG |
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| Protein accession | YP_001314086 |
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| Protein GI | 150377491 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0585815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAA CTCGATTGCT CACGGTCGCC GGCTGCCTAG CCGGACTCGT CTTTGTCAGT
GGCGCGCAGG CACAAAATAT GACAACCAAC GAGGTGAAGG GAACGAAGAT TTCGAGCAAG
TGGCGTGGCA CGCCAGGGCT GGTCACGAAA GGACCGGACG GAAAAGTGAT TTTCCTGTTC
GGGGAAACCC AGCCTTCTGT GGTTTGCTCG CCCCTACAGG TCTGCGACAT AGAGCTCCAA
GGTGGGGAGA TCGTTCGCGA TGTTCTCGTC GGTGACACGG TGCGCTGGAA GGTGGAGCCT
GCGACTTCGG GAGCAACAGG GGGACAGGCG ATTCATCTGG TCGTCAAACC TTCGGAGCCC
AACCTTCTCA CCTCGATGGT GGTCACGACC TCCCGGCGAA CCTATCACAT CCAGCTCAAG
TCCCATCCCA GCCAGTACAT GGCGCGCATT GGCTTCGAAT ATCCCGAAGA CGTATCGACC
AAGCTCTCGG ACATCAATGC TCGCCTCGAG GCCGGCGGCA TTCCAGGTGC CGCGCCCGAC
AAGCTAGACT TTTCCTATTC AATCAGCGGC CAAGCGTCAT GGAAGCCGAA GCGGGTCTAT
TCGGATGGGG TGAAGACATA CATCCATTTT CCAAGGTCGA TTTTCGGTCA GGACGCGCCG
GTCCTCTTCG TCGTTTCCGG CGGTCAAAAT CGCATTGTCA ACTATAGAAT GAAGAACGAC
ATGATGATCG TGGACTATGC AGTCGACAAG GCGATCCTCG TTTCCGGGGT CGGTTGGAGG
CAGCAGAAGA TCATCATTCG GCGGGGAAGC TGA
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| Protein sequence | MQKTRLLTVA GCLAGLVFVS GAQAQNMTTN EVKGTKISSK WRGTPGLVTK GPDGKVIFLF
GETQPSVVCS PLQVCDIELQ GGEIVRDVLV GDTVRWKVEP ATSGATGGQA IHLVVKPSEP
NLLTSMVVTT SRRTYHIQLK SHPSQYMARI GFEYPEDVST KLSDINARLE AGGIPGAAPD
KLDFSYSISG QASWKPKRVY SDGVKTYIHF PRSIFGQDAP VLFVVSGGQN RIVNYRMKND
MMIVDYAVDK AILVSGVGWR QQKIIIRRGS
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