| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5377 |
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| Symbol | |
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| ID | 5319679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 343528 |
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| End bp | 343908 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777147 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_001314079 |
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| Protein GI | 150377484 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.672041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.224067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCATA AGCAAGCACT CATCAGCGTT GTTGCAGCCG CCAGCCTTCT CATAGCTGTG
GTGCCGGCGC TTGCGAGTTC AGGTGGGGGC GGTCTTCCGT GGGAAGGGCC GCTAGAGCAG
ATCCAGGAGT CGATCACGGG CCCGGTCGCT GGATATATTG CCCTTGCGGC CGTCGCCATC
GCTGGCGGAA TGCTCATTTT CGGCGGCGAG CTGAACGATT TCGCGCGGCG ACTTGTGTAC
GTCGTTCTCG TGGCTGGCAT CCTGCTCGGC GCCACTGCCA TCGTTGGTCT GTTCGGCGCG
ACTGGCGCCT CGATCGGGAC TCCAGACGAG CAGATCGCCA AGCTTGGGTC GAACGGAGGA
GGGGAGAAAG CTCATGTCTA A
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| Protein sequence | MLHKQALISV VAAASLLIAV VPALASSGGG GLPWEGPLEQ IQESITGPVA GYIALAAVAI
AGGMLIFGGE LNDFARRLVY VVLVAGILLG ATAIVGLFGA TGASIGTPDE QIAKLGSNGG
GEKAHV
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