| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5369 |
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| Symbol | |
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| ID | 5319671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 337422 |
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| End bp | 338306 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777140 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001314072 |
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| Protein GI | 150377477 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.927106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.182249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC CCAAGCTGCC CCTCAATGCA CTACGTGCCT TCGAAGCATC GGCGCGCCAC
TGCAGCTTCA CGCGTGCCGG GCTGGAGCTA CGGGTTTCGC AGACGGCAAT CAGCCATCAG
GTGAAGGCGC TCGAGGATCT GCTCGGCGTC AAGTTGTTCC GGCGATTGCC CAGGGGCCTT
GCCCTTACCG ATGAAGGCTC AGCCCTTGCC CCGGTTATGA GCGACGTGTT CAAGCGCATG
TGTGCAACCG TCAGCCGCTT CGAGGAAGGG AACTTTCAGG AGGTTGTCAC CGTAGGCGTT
GTCGGCACCT TCGCAGTCGG ATGGCTGATG GAGCGGCTAT CGGACTTTCA TGATGCACAT
CCGAACCTCG ACCTCCGCAT TCTGAGCAAC AACAACCGCG TCGATCTGGC TGGCGACGGC
CTGGATTTCG CGATCCGGTT CGGGGACGGC TCATGGCACG GCACGGAGGC GATGCACCTG
ATCGCCGCGC CGCTATCGCC GGTCTGCTCG CCTTTGATTG CCGCCCGGCT GGTTGAACCG
GCCGACCTTG CCCGAATCGA GCTGCTGCGT TCGTATCGGT CCGATGAGTG GGCGCAATGG
TTTCAAGCGG CGGGCAGCCA GTCTCCCGTT CTGCGCGGCA TGATGTTCGA TACCTCGCTG
GCACTGGCGG AAGCGGCCGC GCGAGGCTTC GGTGCGGCCC TCCTGCCGGT CACCATGTTC
GAGCACTATA TCGAGACGGG GCGTCTGGTG CAGCCTTTCG AGGTCACGGT AGCGGCGGGT
GACTACTGGC TCACATGGCT GAAGTCACGC CAGTTCACCA GAGGCATGCT GGCATTCAAA
AGGTGGCTGA AGGAGCAGTT CTCCGGTCCT TCCGCCGACC TGTAG
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| Protein sequence | MELPKLPLNA LRAFEASARH CSFTRAGLEL RVSQTAISHQ VKALEDLLGV KLFRRLPRGL
ALTDEGSALA PVMSDVFKRM CATVSRFEEG NFQEVVTVGV VGTFAVGWLM ERLSDFHDAH
PNLDLRILSN NNRVDLAGDG LDFAIRFGDG SWHGTEAMHL IAAPLSPVCS PLIAARLVEP
ADLARIELLR SYRSDEWAQW FQAAGSQSPV LRGMMFDTSL ALAEAAARGF GAALLPVTMF
EHYIETGRLV QPFEVTVAAG DYWLTWLKSR QFTRGMLAFK RWLKEQFSGP SADL
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