Gene Smed_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5351 
Symbol 
ID5319653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp312488 
End bp313762 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content59% 
IMG OID640777124 
Productsodium/hydrogen exchanger 
Protein accessionYP_001314056 
Protein GI150377461 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.822179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATT ACCATATCGC TCTTGGATTA TTCGGGGCCG TGGTGCTGTT GACCGCCTGG 
ATTCCCACCG CCTTTCGTCG ACTACCACTT TCACTGCCAA TCTTTTGCAT CGTCATCGGC
ATGCTGGTCG GGCAAACCAT CTTCAATCCA ATCGCCCAAT TGGATTCATT CAACAGCCGC
CTTGTCATCG AACGCATGAC GGAGTTCACC GTCATCGTCG CGCTCATGGG CGCGGGATTG
AAGATTGACC GCCGCGTCGG CCTTCGCAGC TGGGCGCTCA CCTGGAGACT TCTCGGTCTC
GTAATGCCAC TTGGGATAGT GGTGATTGCC CTCGGCGCCA CCTGGATACT CGGGCTCGGG
GCTGCTTCGG CCATTCTCCT CGCCGCTTGT CTTGCCCCGA CAGATCCAGT GCTTGCCAGC
GACGTCCAGG TGGGGCCGCC GGAGACCGGT ACGGAAGACG AGGTCCGCTT CGCCCTTACA
TCCGAGGCAG GCTTGAACGA CGGTCTCAGC TTCCCATTCG TGTATCTGGC AATCGCAATC
GCGCTTGCAC CCGAAGAGCC TGACTGGTTC TCACACTGGC TTCTCTTCGA TGTGGTATGG
CGGCTCCTGG CAGGCATCGC GATGGGGTGG ATAATCGGTA AGTTGCTCGG ACTTGCCACA
TTCCGACTCC CGAGAGAGGC CGCGCTCGTG CGGACCGGCG ACGGCTTCGT GGCACTGGGC
ATCACCTGCA TCGCCTACAG CCTTACCGAA CTCGTCCACG GTTACGGCTT TTTGGCGGTC
TTCGTCGCGG CCCTTTCTTT CCGCAGCATC GAACGGCACC ACGAGTTCCA TAAGGAGCTT
CACGACTTCT CCGAGCAGAT CGAAAGACTT CTGATGATGG TGCTTCTTGT CTGTTTCGGA
GCGGCCGTCA GCGTCGGTCA GCTCATCGAC GAACTCGACT GGCGCCTGGT TTCATTTGCG
CTTTTCGTCC TGTTGATCGT CCGACCGGTT TTCGGTTGGG TATGCCTGCC CTCGATCCTT
CCCAAAGGAG AGAGAGCCGC CATTGCCATT TTCGGGATCC GTGGGCTGGG CTCCATCTAC
TATCTCGCCT TCGCAACAGG GGCGGCCGAT TTCGAGGGTG TGGGCACGCT CTGGTCGTCC
GTGGCCCTGA TCGTGCTGAT ATCCATCGTC ACCCACGGAC TGACCGTCAC GCCGGCAATG
CGCTGGCTCG ACCGGCAGCG TAGAACCGCT CCTGCCGGTA AGCAAAGCGC AGTGGGGAAT
ATACTTGCCA AGTAG
 
Protein sequence
MEHYHIALGL FGAVVLLTAW IPTAFRRLPL SLPIFCIVIG MLVGQTIFNP IAQLDSFNSR 
LVIERMTEFT VIVALMGAGL KIDRRVGLRS WALTWRLLGL VMPLGIVVIA LGATWILGLG
AASAILLAAC LAPTDPVLAS DVQVGPPETG TEDEVRFALT SEAGLNDGLS FPFVYLAIAI
ALAPEEPDWF SHWLLFDVVW RLLAGIAMGW IIGKLLGLAT FRLPREAALV RTGDGFVALG
ITCIAYSLTE LVHGYGFLAV FVAALSFRSI ERHHEFHKEL HDFSEQIERL LMMVLLVCFG
AAVSVGQLID ELDWRLVSFA LFVLLIVRPV FGWVCLPSIL PKGERAAIAI FGIRGLGSIY
YLAFATGAAD FEGVGTLWSS VALIVLISIV THGLTVTPAM RWLDRQRRTA PAGKQSAVGN
ILAK