Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5351 |
Symbol | |
ID | 5319653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 312488 |
End bp | 313762 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640777124 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001314056 |
Protein GI | 150377461 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.822179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCATT ACCATATCGC TCTTGGATTA TTCGGGGCCG TGGTGCTGTT GACCGCCTGG ATTCCCACCG CCTTTCGTCG ACTACCACTT TCACTGCCAA TCTTTTGCAT CGTCATCGGC ATGCTGGTCG GGCAAACCAT CTTCAATCCA ATCGCCCAAT TGGATTCATT CAACAGCCGC CTTGTCATCG AACGCATGAC GGAGTTCACC GTCATCGTCG CGCTCATGGG CGCGGGATTG AAGATTGACC GCCGCGTCGG CCTTCGCAGC TGGGCGCTCA CCTGGAGACT TCTCGGTCTC GTAATGCCAC TTGGGATAGT GGTGATTGCC CTCGGCGCCA CCTGGATACT CGGGCTCGGG GCTGCTTCGG CCATTCTCCT CGCCGCTTGT CTTGCCCCGA CAGATCCAGT GCTTGCCAGC GACGTCCAGG TGGGGCCGCC GGAGACCGGT ACGGAAGACG AGGTCCGCTT CGCCCTTACA TCCGAGGCAG GCTTGAACGA CGGTCTCAGC TTCCCATTCG TGTATCTGGC AATCGCAATC GCGCTTGCAC CCGAAGAGCC TGACTGGTTC TCACACTGGC TTCTCTTCGA TGTGGTATGG CGGCTCCTGG CAGGCATCGC GATGGGGTGG ATAATCGGTA AGTTGCTCGG ACTTGCCACA TTCCGACTCC CGAGAGAGGC CGCGCTCGTG CGGACCGGCG ACGGCTTCGT GGCACTGGGC ATCACCTGCA TCGCCTACAG CCTTACCGAA CTCGTCCACG GTTACGGCTT TTTGGCGGTC TTCGTCGCGG CCCTTTCTTT CCGCAGCATC GAACGGCACC ACGAGTTCCA TAAGGAGCTT CACGACTTCT CCGAGCAGAT CGAAAGACTT CTGATGATGG TGCTTCTTGT CTGTTTCGGA GCGGCCGTCA GCGTCGGTCA GCTCATCGAC GAACTCGACT GGCGCCTGGT TTCATTTGCG CTTTTCGTCC TGTTGATCGT CCGACCGGTT TTCGGTTGGG TATGCCTGCC CTCGATCCTT CCCAAAGGAG AGAGAGCCGC CATTGCCATT TTCGGGATCC GTGGGCTGGG CTCCATCTAC TATCTCGCCT TCGCAACAGG GGCGGCCGAT TTCGAGGGTG TGGGCACGCT CTGGTCGTCC GTGGCCCTGA TCGTGCTGAT ATCCATCGTC ACCCACGGAC TGACCGTCAC GCCGGCAATG CGCTGGCTCG ACCGGCAGCG TAGAACCGCT CCTGCCGGTA AGCAAAGCGC AGTGGGGAAT ATACTTGCCA AGTAG
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Protein sequence | MEHYHIALGL FGAVVLLTAW IPTAFRRLPL SLPIFCIVIG MLVGQTIFNP IAQLDSFNSR LVIERMTEFT VIVALMGAGL KIDRRVGLRS WALTWRLLGL VMPLGIVVIA LGATWILGLG AASAILLAAC LAPTDPVLAS DVQVGPPETG TEDEVRFALT SEAGLNDGLS FPFVYLAIAI ALAPEEPDWF SHWLLFDVVW RLLAGIAMGW IIGKLLGLAT FRLPREAALV RTGDGFVALG ITCIAYSLTE LVHGYGFLAV FVAALSFRSI ERHHEFHKEL HDFSEQIERL LMMVLLVCFG AAVSVGQLID ELDWRLVSFA LFVLLIVRPV FGWVCLPSIL PKGERAAIAI FGIRGLGSIY YLAFATGAAD FEGVGTLWSS VALIVLISIV THGLTVTPAM RWLDRQRRTA PAGKQSAVGN ILAK
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