| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5349 |
|---|
| Symbol | |
|---|
| ID | 5319651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 310491 |
|---|
| End bp | 311804 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640777122 |
|---|
| Product | glutamine synthetase catalytic region |
|---|
| Protein accession | YP_001314054 |
|---|
| Protein GI | 150377459 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.791079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG AGGAAATGAT GGTCGCCTGC TGCGGCGACC TTTCAGGCAA GGTGCGCGGC
AAGGCCTTTC CACTGGCGCA AATGGAAAAG CGCTTGAAGC AGGGCGTCGG CTGGACGCCG
ACCAATGTTC AGATCACCTG CTTCGACGCC ATCGCCGAAA GCCCCTTTGG CTCGCTCGGC
GATCTCGTGC TCATTCCCGA TCCATCGACC CGCGTCAGCA TAGAAAGCGG GGAGGGCACG
CCGAAGGAGA ATTTTGTCCT CGGCAACATC CGCTATACCG ACGGACGGCC CTGGGAGCTC
TGCACGCGCT CGATCCTGGA GGCCGCCCTT GAGCGGCTGC ACAGGGTGGC GGGTGTTACG
CTCTATGGCG CCTTCGAGCA TGAATTCCAA CTCAGGCACC GCGTTTCGGA CGTCGGCAAG
GCTTTCACGC TCGGCGGCTT CCAGGAAGAG CGGCATTTCT GCGAGGCGAT CATCGCCGCG
ATGCGCGAGG CGGGCGTGAC GCCCGACACG ATCCTCAAGG AATTCGGTGC CGGCCAGTTC
GAGGTGACGA TGGGGCCCCA GAAGGGCGTC ACCATTGCCG ACCATTCGCT GATCACCCGC
GAACTCGTCG GCCTCGTTGC CCGCGAACTG TGCTACGAGC CGACCTTCAC GCCGATCCGT
GATCCGGCCG GCGTTGGCAA CGGTGTGCAT GTGCATATGA GCATGCTGGA TTCGTCAGGC
AACCCGGTCA CCTACGACCC GAACGGCAAA CACGAGCTCT CCGATGTCGC GGGAAAATTC
GTCGCGGGCA TTCTGAAATA TCTCGACTCA ATCGTCGCGA TCACGGCGCC GAGCGTGGTC
TCCTATCTGC GTCTCACGCC ACATCGCTGG AGCGCAGCGT TCAACAATCT CGGTTTTCGC
GACCGCGAGG CCTCGGTGCG GATCTGCCCC ATCTCAGACA TCAGCGACGT CGCACGGGCT
GCCCAGTTCA ACTTCGAATT CCGCGCTGCC GATGCAACCG CCAACCCCCA TCTTGCCCTG
GCCGCCATCG TTCATGCCGG CGTGCAGGGC ATCGAGGAAA GCCTGGCGGT TCCGGAGGCG
ACGCAGGAGG ATTTGTCTCT CCTGAACCCG GAGGCGCTTT CCGAGCGCGG CTACGTCCGG
TTGCCGCAGA CGCTCGAGGC CGCCCTCCAG CGCTTCCAGG ACAATGCGAC CGTTTGCGGC
TGGTTCCCCG AGGGCTTTGC CGACGTTTAT CTCAAGCACA AGGAGGGCGA GATAGCTTAT
CTTGCGGGCA AGACGCAGAC GGAGATCTGC AAGGCCTATG AAGGCGTCTA CTGA
|
|---|
| Protein sequence | MKREEMMVAC CGDLSGKVRG KAFPLAQMEK RLKQGVGWTP TNVQITCFDA IAESPFGSLG
DLVLIPDPST RVSIESGEGT PKENFVLGNI RYTDGRPWEL CTRSILEAAL ERLHRVAGVT
LYGAFEHEFQ LRHRVSDVGK AFTLGGFQEE RHFCEAIIAA MREAGVTPDT ILKEFGAGQF
EVTMGPQKGV TIADHSLITR ELVGLVAREL CYEPTFTPIR DPAGVGNGVH VHMSMLDSSG
NPVTYDPNGK HELSDVAGKF VAGILKYLDS IVAITAPSVV SYLRLTPHRW SAAFNNLGFR
DREASVRICP ISDISDVARA AQFNFEFRAA DATANPHLAL AAIVHAGVQG IEESLAVPEA
TQEDLSLLNP EALSERGYVR LPQTLEAALQ RFQDNATVCG WFPEGFADVY LKHKEGEIAY
LAGKTQTEIC KAYEGVY
|
|---|
| |