| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5345 |
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| Symbol | |
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| ID | 5319647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 306693 |
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| End bp | 307865 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777118 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001314050 |
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| Protein GI | 150377455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.040092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.403221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGA CTTCCAAACT GTTTCTTGCT GCGGCAGGCA TCGCGCTTGC CTCTTCCGCA
TCCTTTGCCG ACGACGACAA GATCGTGATC GGCGGAGCAC TCTCGATGAC CGGCATCCAG
GCGCCGCTCG ACACGCCCGG CTACAACGGC GCGCAGGTCG CCGTAAAATT TCTCAACGAC
AATGGCGGCG TCCTCGGCAA GCAGATCGAA TTCATCAACA TCGATGGCAA ATCGGATCCG
GTAACAGTCG GAAACGTCGC GGTGGAATTG ATCGACAAGG GTGCGCAGGT CATCGTGGCG
CCTTGCGATT TCGACTTCGG CTCGCCCGCA AGCCGCGAGG CGCAGTCGGC CGGCCTCGTC
GGTATTTCGA CCTGCGCCTC CGACCCGCTC TATTCCTCCT GGTCCCTCGG TGACAAGCAG
TTCACGCTTT CCATGTGGAA CACCACGATG GGCGCGACGG CCGCCGATTT CGCCGTGAAG
GAAAAGGGCT GGAAGACTGC TTACGTCGTC ACCGACCAGT TCATCGCCTA TACCAAGTCG
CTCTCGAAAT ATTTCGTGGA GCAGTTCAAG GCCAATGGCG GCGAAATCCT CCTCGAAGAC
ACCTACACCA ACGGCGACAA CAATTTCTCC GCCCAGCTCG CCCGCCTCCA GGCGCTCGGC
AAAAAGCCGG ACGTGATCTT CGTCTCCTCC TATGGAACGG ACATCGGCGT GATCATCCGC
GCGCTTCGCG AAGTCGGCTA CGATGCGCCG GTTCTGGGCG GCGACGCCTA TGACGACCCG
GCCATGCACC AGGCACTCGG CGAACAATTC GGCAATCACG TCTACTTCGT TACTCATACC
TGGATGGGCC CGGAAGCCCA CCCGGAGATG CCGAAATTCA TCGAACTCTA TACGGAGATG
TTCGGCAAGG CACCGGACAC ATCCTTCGTC TCGACGGGCT GGGACACGAT CATGCTGCTC
GCGGAAGCAA TCAAGGCGGC CGGGACGACC GAAGGCGCAG CGCTTGCCAA GGCACTGGAG
GATGGCCAGT TCAAACTGTT GACCGGCGAT CTCGACTACG GCACGAACGA GGAAGGCCAT
GTACCGAACA AGGCCGCGGC CGTGATCGAG CTCAAGGCCG GAAAGCCGAG CTTCGTCGGA
TGGCGCAAGC CGGAATCCCT GCCGAAGCCC TGA
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| Protein sequence | MIKTSKLFLA AAGIALASSA SFADDDKIVI GGALSMTGIQ APLDTPGYNG AQVAVKFLND
NGGVLGKQIE FINIDGKSDP VTVGNVAVEL IDKGAQVIVA PCDFDFGSPA SREAQSAGLV
GISTCASDPL YSSWSLGDKQ FTLSMWNTTM GATAADFAVK EKGWKTAYVV TDQFIAYTKS
LSKYFVEQFK ANGGEILLED TYTNGDNNFS AQLARLQALG KKPDVIFVSS YGTDIGVIIR
ALREVGYDAP VLGGDAYDDP AMHQALGEQF GNHVYFVTHT WMGPEAHPEM PKFIELYTEM
FGKAPDTSFV STGWDTIMLL AEAIKAAGTT EGAALAKALE DGQFKLLTGD LDYGTNEEGH
VPNKAAAVIE LKAGKPSFVG WRKPESLPKP
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