| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5339 |
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| Symbol | |
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| ID | 5319641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 301281 |
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| End bp | 302594 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640777112 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001314044 |
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| Protein GI | 150377449 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGTC TCTACGCCCG CGAAAGCCGT TCGATCTCCA GCATGGCGCA TCTGCGGTTC
TTTCCGCAGG CCGTCGTAGG CGGCAGCGGC GCCTATCTGA CCGCCGACGA TGGGCGACGG
CTTCTCGATT TCTCCGCCTC CTGGGGTGCT GCGAGCCTCG GCCATTCCCA TCCAGCAATC
CGCGAGGCGG TAGACCGCGC ACTCTCCGAT CAGGCGGGCG CCAGTTATCT TTCGACTGCC
AACGAGCCCT GCGTGCTGCT CGCCGAAAAG CTGCTTTCCC TGGTACCGGA ACGCGCCCGC
GGCCGCATCT GGTTCGGTCA TTCCGGTTCC GACGCCAATG AGACCGTCGC CCGCATGGTC
GTCGCCGCCA CCGGCCGGCC GCGCATCCTC GCCTTTGAGG GGGCCTATCA CGGCGGCACC
GTCGGTTCCA TGGGCATTTC CGGCCATCCG GCACAGCAAG GCGGACGAGC GGAAGGCCTG
ACACTGGTGC CATACCCGAA CAGCTACGCC GCTGGCAGTC CCGAGGCCGC AAAGGACGCC
GCGCTCGCCC GTCTCCAACA TCTTTTCGCG ACAGAGCTGC CACCGGGTGA GGTCGCTGCC
TTCTTCATCG AACCGATCCA GTCGGACGGC GGCATGCTTT TGCCCCCGGA CGGGTTCTTC
AAGGCGGTGG AGGCGCTCTG CCGCAAGCAC GGCATCCTGA TCGTGTCGGA CGAGGTGAAG
GTCGGCCTCG GTCGCAGCGG ACGCTTCAAC GCCTTCGAAC AGTCGGGTAT CGAACCGGAT
ATTATCGTTT TCGGAAAAGG GCTCGGCGGC GGCCTGCCGA TTTCTGCGGT GGTGGGGCCG
GAAGCCGTCA TGAACCACGC CGTCGCCTTC TCGCTGCAGA CCGTGCACGG CAATCCAATC
TGCGCGGCCG CCGCGCTGGC GGTGCTGCAG ACGATAGAGC GCAACCGTCT CGCCGAAAAT
GCGGAAAGGA CCGGCGGGGT GCTGCGCGAA TCGCTCGACC GCCTTGCCGC CCGTCACAGG
CTTATCGGCG ATGTGCGCGG CCGCGGCCTG GCTCTCGGCG TCGAACTCGT GGAGGATCGC
ACCAGCCGTA AACCGGCTTC GCGGCAGACG GCGCTGACCG TCTACCGCGC CTTCCAACTC
GGCCTTGTTC TTTACTATGT CGGCGTTCGG TCCAACGTGC TCGAACTCAC GCCACCGCTG
ACGTTGACGC AGGCCGAGGC TCGGGAGGGT GTCGCCATTC TCGATCAGGC GCTCGCCGAT
GTGGCGGCCG GACGGATCGA TGATGCCGTG CTTGAGGATT TCGCCGGCTG GTAG
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| Protein sequence | MPGLYARESR SISSMAHLRF FPQAVVGGSG AYLTADDGRR LLDFSASWGA ASLGHSHPAI
REAVDRALSD QAGASYLSTA NEPCVLLAEK LLSLVPERAR GRIWFGHSGS DANETVARMV
VAATGRPRIL AFEGAYHGGT VGSMGISGHP AQQGGRAEGL TLVPYPNSYA AGSPEAAKDA
ALARLQHLFA TELPPGEVAA FFIEPIQSDG GMLLPPDGFF KAVEALCRKH GILIVSDEVK
VGLGRSGRFN AFEQSGIEPD IIVFGKGLGG GLPISAVVGP EAVMNHAVAF SLQTVHGNPI
CAAAALAVLQ TIERNRLAEN AERTGGVLRE SLDRLAARHR LIGDVRGRGL ALGVELVEDR
TSRKPASRQT ALTVYRAFQL GLVLYYVGVR SNVLELTPPL TLTQAEAREG VAILDQALAD
VAAGRIDDAV LEDFAGW
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