| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5330 |
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| Symbol | |
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| ID | 5319632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 289588 |
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| End bp | 290154 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777103 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001314035 |
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| Protein GI | 150377440 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.733819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGGA TCAAGGAATT TGACAAGGAG GAGGTATTGG ACGCGGCGAT CGCCGTATTT
CGCGAGCACG GATTCGAGGG CACCTCCACG GAAATGCTCG TACGGGTTAT GAATATCGGC
CGCCAGAGCC TCTATGACAC GTTCGGCGAC AAGTGGAAGC TCTACCGCCT GGCGGTGGAA
CGCTATTCCG CCGAAGAGAC ACGTGCTCAT ATCGAATTGT TGCGCGGGAC GCCGCGCGCC
CTGGACGGTA TTCGGTCAAT GATGGCACGC GTCGTCGAAA ATGCCGGTCA AGCGTGTCTC
GGCGTCAACT CTATCTGCGA ATTCGGCCAA AGCCGGCCGG ACCTGACGGC ACTGCACCAC
GCAGCGGATC TTCGGCTCAA GAAGGTCGCT ATTGAACGCG TAAGGGAAGC TCAGGACGCA
GGTGATATAG CCGTCTCGTT GTCCGCAGAG GCCGTGGCAG ATTTCCTCTT CGCCAATATC
ACCGGTATCC GCATCGCCGC ACGTGGCGGA GCCGGCCCGG AACAGCTTCA ATCCCTCAGC
GGGTTGGCGC TTCGCGCAAT AATCTAG
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| Protein sequence | MARIKEFDKE EVLDAAIAVF REHGFEGTST EMLVRVMNIG RQSLYDTFGD KWKLYRLAVE
RYSAEETRAH IELLRGTPRA LDGIRSMMAR VVENAGQACL GVNSICEFGQ SRPDLTALHH
AADLRLKKVA IERVREAQDA GDIAVSLSAE AVADFLFANI TGIRIAARGG AGPEQLQSLS
GLALRAII
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