Gene Smed_5324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5324 
Symbol 
ID5319626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp282632 
End bp283390 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content60% 
IMG OID640777098 
Producthypothetical protein 
Protein accessionYP_001314030 
Protein GI150377435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.704501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC GCTATATCAT CACCCTTGCG CTTGCTTTCG CCAGCAGCGT GATCGCTTTC 
GCCGCGCATG CCGCTGACGT GAAAAACATT GTTATCGTAC GCGGGGCTCT CGCTGATGGT
TCCGGCTGGC GCAAGGCGAC GGAAATACTC GAAAGCCGGG GCTTCCACGT CACGATAGTC
CAGCAGCCGA TTACTTCGCT TGCCGACGAC GTGGCAGCCA CCGAGCGCGT TCTGGACCTG
CAGGACGGGC CAAGCTTGCT TGTCGGTCAT AGCTATGGCG GAATGGTCAT CACGGAGGCA
GGCAACCGTC CTGATGTCGC CGGTCTCGTC TATGTGGCCG CCTTCCAGCC GAACAAGGGC
GAAAGCCTGT TCGACCTCGC GAGTTCGAAA CCACCGGCCG GCAAGAACAT CAAGGAAACG
TCTGACGGCA AGTATCTCTA CTTGGACCCG CATGCCTTCG CCGAAGATTT TGCAGCTGAT
CTGCCCAAGC CCGAAGCCAG CTTCATGGCA AGGTCGCAGG TTTTCGCTTC TAAGGAAGCG
TTCGCAGCAA AGGTCGACGA TCCGGCGTGG AAGACGAAAA TGAGCTGGAC CGTGGTCGCA
ACGGAGGATC GGTCCATTCA TCCGGATCTC GAGCGGGCAA TGGCGAAGCG CGCCGGCAGC
ACCGTGACGG AGATCAATTC CAGCCACGCT GTCTTTGCCT CTCACCCGCA AGAAGTCGCC
GACATCATCG CTGAAGCAGC CGGGAAGGCG GGCCGCTGA
 
Protein sequence
MNRRYIITLA LAFASSVIAF AAHAADVKNI VIVRGALADG SGWRKATEIL ESRGFHVTIV 
QQPITSLADD VAATERVLDL QDGPSLLVGH SYGGMVITEA GNRPDVAGLV YVAAFQPNKG
ESLFDLASSK PPAGKNIKET SDGKYLYLDP HAFAEDFAAD LPKPEASFMA RSQVFASKEA
FAAKVDDPAW KTKMSWTVVA TEDRSIHPDL ERAMAKRAGS TVTEINSSHA VFASHPQEVA
DIIAEAAGKA GR