Gene Smed_5301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5301 
Symbol 
ID5319603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp261182 
End bp261463 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content55% 
IMG OID640777076 
Producthypothetical protein 
Protein accessionYP_001314008 
Protein GI150377413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.560349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCCC GAACAAAACA CCGAACGGTC CATTTTGATA AACCATTCTG GATATCGGGA 
CTGTCTGAGA TGGTCACTGC CGGCGACTAT GTCGTCGATG AAGACGAGGA ATTGATCGAA
GGTCTCTCCT GGTCGGCGTA TCGTCGCGTA GCAACCTTCA TCACGCTCCC GGCAACAAGC
GCGAACAAGC ACCGCATGCG CCTGATGCCG ATCGATCCAG AGGAGCTTGA AGGTCTCATA
GCACTCGATC GGCGCAACGC CGAAGCGCCG TCTCAACTTT GA
 
Protein sequence
MYARTKHRTV HFDKPFWISG LSEMVTAGDY VVDEDEELIE GLSWSAYRRV ATFITLPATS 
ANKHRMRLMP IDPEELEGLI ALDRRNAEAP SQL