| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5297 |
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| Symbol | |
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| ID | 5319599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 259172 |
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| End bp | 260125 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777072 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001314004 |
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| Protein GI | 150377409 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.460339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCG AAACAGGTCA GAAGCAGCGC GAAATCCAGA AGCAGGTCGA CGAGGCTGAC
AAGCGGGAGA AGCCGAAGAC CTCGGGAGCC ATGCAGGCAG GCGCTCGCCG CTACCCAGAA
CCGCCGTTTC CAAAGGTGCA TCAGGACAAG CCAGGCTCGG AGGCTGATCT TCCTGTCGCG
CCAATGTATG ATGCCCCGTT TTACAAGGGC TCAGACAAGC TAAAGGACAA GGTAGCACTT
ATCACAGGCG GTGACTCCGG CATCGGGCGG TCGGTTGCGG TCCTCTTTGC TCGCGAAGGG
GCGGACGTCG CAATTGTTCA TCTCGACGAA GCTCAGGACG CAGAAGACAC AAAAGCTGCT
GTTGAGAAGG AAGGACGCAA GTGCCTGGTG ATCAGAGGCG ACGTAAAGGA TGCGAGCTTC
TGCCGGAAGG CAGTGGAAAA GACCGTTATG CAACTTGGCC GTCTCGACAT CCTCGTCAAC
AATGCCGCCT TCCAGGTGCA CACGCAGGAT ATCCAGGACC TGACCGACGA GCACTTCGAC
GAGACGCTGA AGACGAACCT CTATGGTTAC TTCTACATGG CAAAGGCGGC TATTCCTCAT
TTGAAGAACG GCTCGGCAAT CATAAACACT GGATCAGTCA CCGGCCTTAC CGGTTCGAAG
GAGCTTCTCG ACTACTCCAT GACCAAGGGG GGCATTCACG CCTTCACCCG CGCCCTTTCG
GGACATCTCG TTCCTAAAGG TATCCGCGTG AACGCCGTCG CCCCGGGCCC CGTCTGGACG
CCTCTCAATC CGTCAGACAA AGCGGCTGAA GATGTGGAGA AGTTCGGGTC CCAAACCCCG
ATGAAGCGTG CTGCACAGCC TGAGGAAATT GCGCCGGCCT ACGTCTTTCT CGCCTCCCCG
CAGATGTCGA GCTATATCAC CGGCGAGATC CTCCCGATCG TCGGCGGTTA CTGA
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| Protein sequence | MKSETGQKQR EIQKQVDEAD KREKPKTSGA MQAGARRYPE PPFPKVHQDK PGSEADLPVA
PMYDAPFYKG SDKLKDKVAL ITGGDSGIGR SVAVLFAREG ADVAIVHLDE AQDAEDTKAA
VEKEGRKCLV IRGDVKDASF CRKAVEKTVM QLGRLDILVN NAAFQVHTQD IQDLTDEHFD
ETLKTNLYGY FYMAKAAIPH LKNGSAIINT GSVTGLTGSK ELLDYSMTKG GIHAFTRALS
GHLVPKGIRV NAVAPGPVWT PLNPSDKAAE DVEKFGSQTP MKRAAQPEEI APAYVFLASP
QMSSYITGEI LPIVGGY
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