Gene Smed_5296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5296 
Symbol 
ID5319598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp258573 
End bp258962 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content57% 
IMG OID640777071 
Productregulatory protein ArsR 
Protein accessionYP_001314003 
Protein GI150377408 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.891098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.548159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAC TTAAGCGTAT GATTGAGTAT TCTAAACAAT TGGACATGGC TTTTCATGCG 
CTCTCGGATG CGACGCGTCG GGGGATTCTC GATCGCCTTT CACGAGGGCC TGCTTCGGTA
AGCGAACTCG CTAAGCCTTA CGAATCTTCG TTCGCAGCAA TCCTTCAGCA CGTGCAAGTC
CTCGAGGCGA GCGGGCTCAT AGTGACGGAA AAACGCGGCC GCACCCGCGA GTGCCGCATA
TCCCACGACA CCGTGCAGCG CATCGAGCAT TGGCTAAGCG AGCGCCGCCA CCTCTGGGAG
AGCAGGTTCG ACCGACTAGG AATACTGCTC GAAAACGGCG GTCCAGTAGA CGCTGGGTTG
CCGCATGCGG CGACAAAGGG AGATAATTGA
 
Protein sequence
MASLKRMIEY SKQLDMAFHA LSDATRRGIL DRLSRGPASV SELAKPYESS FAAILQHVQV 
LEASGLIVTE KRGRTRECRI SHDTVQRIEH WLSERRHLWE SRFDRLGILL ENGGPVDAGL
PHAATKGDN