Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5279 |
Symbol | |
ID | 5319581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 241913 |
End bp | 242347 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777056 |
Product | hypothetical protein |
Protein accession | YP_001313988 |
Protein GI | 150377393 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.525836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATT CCGCAGGCCA TGGAAAATGT GCGATGAGAC ACCCTACCAA CCGCCGCACG ATGCTAATGA CCGCAGGAGC TGCCGCGGTC GCCGCGGTCG CCGGACCAGT CGCTGCGCAA TCCACCGATA TTCGCGGTGC GGTCACATTC GAGGGCAGCG CGGTTATCCC GGAAGGTCAT GTCGAGATCT ATCTCGAGGA TCCTGCCATT CAGGATAAGG CCCGACGCCG CGGTACCCAG ACGCGCATCA AAAGTGATGG CAGATCAAAG TCGATAGCGT TTACCCTGTC CCTGCCCGCA AGCACGACGG CTTCGCCGAC GCGGCGGATC GTGGCGCGGT TGGAGCGTGC GGATGGCTGG CTGGTCGCGC GCGGCAGCAC ACAGTTGGAG GCGGGTACGC CCGTCTACCT CACGCTCAAT GCAGTTATCT ATTGA
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Protein sequence | MKDSAGHGKC AMRHPTNRRT MLMTAGAAAV AAVAGPVAAQ STDIRGAVTF EGSAVIPEGH VEIYLEDPAI QDKARRRGTQ TRIKSDGRSK SIAFTLSLPA STTASPTRRI VARLERADGW LVARGSTQLE AGTPVYLTLN AVIY
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