Gene Smed_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5279 
Symbol 
ID5319581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp241913 
End bp242347 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID640777056 
Producthypothetical protein 
Protein accessionYP_001313988 
Protein GI150377393 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.525836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATT CCGCAGGCCA TGGAAAATGT GCGATGAGAC ACCCTACCAA CCGCCGCACG 
ATGCTAATGA CCGCAGGAGC TGCCGCGGTC GCCGCGGTCG CCGGACCAGT CGCTGCGCAA
TCCACCGATA TTCGCGGTGC GGTCACATTC GAGGGCAGCG CGGTTATCCC GGAAGGTCAT
GTCGAGATCT ATCTCGAGGA TCCTGCCATT CAGGATAAGG CCCGACGCCG CGGTACCCAG
ACGCGCATCA AAAGTGATGG CAGATCAAAG TCGATAGCGT TTACCCTGTC CCTGCCCGCA
AGCACGACGG CTTCGCCGAC GCGGCGGATC GTGGCGCGGT TGGAGCGTGC GGATGGCTGG
CTGGTCGCGC GCGGCAGCAC ACAGTTGGAG GCGGGTACGC CCGTCTACCT CACGCTCAAT
GCAGTTATCT ATTGA
 
Protein sequence
MKDSAGHGKC AMRHPTNRRT MLMTAGAAAV AAVAGPVAAQ STDIRGAVTF EGSAVIPEGH 
VEIYLEDPAI QDKARRRGTQ TRIKSDGRSK SIAFTLSLPA STTASPTRRI VARLERADGW
LVARGSTQLE AGTPVYLTLN AVIY