| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5266 |
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| Symbol | |
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| ID | 5319568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 226938 |
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| End bp | 227525 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777043 |
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| Product | PfpI family intracellular peptidase |
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| Protein accession | YP_001313975 |
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| Protein GI | 150377380 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.57305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGCA AGAAAATCCT CATGCTGACC GGTGAGTTCA CCGAGGAATA TGAGATCTAC
GTGTTCCAGC AGGGGATGGA GGCAGTTGGC CATACGGTTC ACGTCGTCTG CCCGGACAAA
AAGGCTGGCG ACCGCATCAA GACCTCTCTG CACGACTTCG AGGGCGACCA GACCTACACG
GAGAAGCTCG GCCATTATGC CGACATCAAC AAGACGTTCT CCGACGTGCG CGTCGAGGAA
TATGACGCGG TCTATGCGGC CGGGGGCCGC GGGCCGGAAT ATATCCGCAC CGACAAACGC
ATCCAGGACA TGGTCCGCCA TTTTCATGAT ACCGGCAAGC CGATCTTCAC GATCTGCCAT
GGCGTGCAGA TCCTGATGGC TGTCCCTGGC GTGCTGGAAG GCCGCAAAGT TGCCGGCCTC
GGCGCCTGCG AACCGGAGGT CACGGCTGTC GGTGGCACCT ATATCGACGT GAAGCCCACC
GAGGCCTATG TCGACGGCAA TATGGTCTCG GCAAAGGGAT GGACGGGCCT TGCAGCTTTC
ATGCGCGAGT GCCTGAACGT GCTCGGCACG AAGATCACGC ACACCTAG
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| Protein sequence | MSGKKILMLT GEFTEEYEIY VFQQGMEAVG HTVHVVCPDK KAGDRIKTSL HDFEGDQTYT
EKLGHYADIN KTFSDVRVEE YDAVYAAGGR GPEYIRTDKR IQDMVRHFHD TGKPIFTICH
GVQILMAVPG VLEGRKVAGL GACEPEVTAV GGTYIDVKPT EAYVDGNMVS AKGWTGLAAF
MRECLNVLGT KITHT
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