| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5265 |
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| Symbol | |
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| ID | 5319567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 225907 |
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| End bp | 226875 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777042 |
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| Product | putative ABC transporter, periplasmic solute-binding protein |
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| Protein accession | YP_001313974 |
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| Protein GI | 150377379 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.108745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCA TGAAAAAAAA GGCCTGTCTC TTGTTATCGA CCGCCGCGCT GATCCTCGCC
CTGCCGCTCG GCAGTGCCCA TGCCGAGAAC AGTAAGGTGA CGATCGCCGT CTCGATTCCG
GCCGCTACGC ATGGATGGAC GGGCGGAGTC GTCTACCATG CCGAGCAGGC GGAAAAGGAA
CTTGAAGCCG CCTTCCCGAA TGTCGACGTC GTGCTGTCGA CGGCATCCTC CGCTACCGCA
CAAGTCTCCG CCCTCGAAGA CCTTTCGGCA AGCCGCAAGC TCGACGCGCT GGTCATCCTG
CCATTCACCT CTGAGGAACT GACCGGACCG GTCGAGCAGA TCAAGCAGAA GGGCACCTTC
ATTTCCGTGG TCGACCGCGG CCTCACGGAT CCGAACGTGC AGGATCTCTA TGTCGCCGGC
GACAACATTG CCGTCGGCGC CAACACTGCG CACTGGCTCG CTGACAAACT TGGCGGCGAG
GGCAAAATCG TCGTGCTGCG CGGCATTCCC ACCGTCATCG ACGACGAACG CATCAAGGGT
TTTTCCGACG TCATCAGCAA GACCAAGATA GAGATCCTCG ACATTCAGTA TGCCAACTGG
AATCAGGATG AAGCCTTCAA GCTGATGCAG GACTATCTTG CGAAGTATCC AGAGATCGAT
GCCGTCTGGG CGAACGACGA TGACATGCTG CTCGGTGTCC TGGAGGCCAT CGACAATGCA
GGGCGCAAGG ACATCAAATA CGCCCTCGGC GGCAACGGCA TGAAGCAGAT CATCGAGATG
GTGAAGGCCA AGGACGAGCG CACGCCGATC TCGACTCCCT ACCCGCCGTC GATGATCAAG
TCGGCAATGT ACATGACGGC GGCGCAGTTC AATGGACAGG CACCGGTACG CGGTTCCTTC
CTGCTGGGCG CGCCGCTGAT CACGCCGGAG AATGCCGACC AGTTCTACTT TCCCGATTCA
CCATTCTGA
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| Protein sequence | MKSMKKKACL LLSTAALILA LPLGSAHAEN SKVTIAVSIP AATHGWTGGV VYHAEQAEKE
LEAAFPNVDV VLSTASSATA QVSALEDLSA SRKLDALVIL PFTSEELTGP VEQIKQKGTF
ISVVDRGLTD PNVQDLYVAG DNIAVGANTA HWLADKLGGE GKIVVLRGIP TVIDDERIKG
FSDVISKTKI EILDIQYANW NQDEAFKLMQ DYLAKYPEID AVWANDDDML LGVLEAIDNA
GRKDIKYALG GNGMKQIIEM VKAKDERTPI STPYPPSMIK SAMYMTAAQF NGQAPVRGSF
LLGAPLITPE NADQFYFPDS PF
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