| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5264 |
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| Symbol | |
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| ID | 5319566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 224883 |
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| End bp | 225878 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777041 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001313973 |
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| Protein GI | 150377378 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0249777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAG CGACAGCAAC AATCGTACCG GCTGAGGAGG GCACCCGTAT CCGCTGGGCC
GATCTGGCGC CCTTTATCGC TCTTGCAGCA ATCGTGCTGT TTGGCGCGCT CGTGAACGAC
AATTTCGTTT CATCGGCCAA CCTGATCAAC GTGGTAACGC GCAGCGCCTT CGTGGCCATA
ATTGCCGTTG GAGCGACCTT CGTCATTTCA TCCGGGGGGC TCGACCTTTC CGTCGGCTCG
ATGATGGCCT TCGTCACCGG CATTATGATC ATGGCGATGA ACCACCTCGT TCCGTCCTTC
GGGGACTGGG CAATCCCGAT GGGAGCAGGT GTGGCGCTGG TAGTCGGCGT GATGTGCGGG
TTGCTCAACG GTCTCATCGT GACGATCGGG CGCATAGAGC CCTTCATTGT GACGCTGGGC
ACGATGGGCA TCTTCCGCGC CTTCATCACC TTCTTGACAG ACGGCGGCTC CCTGCCCATC
GACCGCAGTC TGCGGGAGGC CTACCGGCCG GTCTATTTCG GCAGCCTCTT CGGCATTCCC
TATCCCGTGC TGATCACCTT CGTCGTCGTC ATGCTGGGCG CTTTCCTGCT CTATAAGACG
AAATACGGCC GCCGCCTGAC CTCGGCCGGC TCGAATGTCG AAGTCGCCCG TTTTTCCGGC
GTCAATGTCT CAGGTGTCCG CACCGTCGCC TATGTGATCC AGGGTGTCTG CGTCGCGGTT
GCGGCCATCT GCTACGTGCC GCGTCTCGGC GCCGCGACGC CGACGACCGG GCAACTCTGG
GAATTACAGG TCATCACCGC CGTCGTGATC GGCGGCACCC TACTTCGCGG CGGACGAGGG
CGTATCGGCG GTACCGTGGC CGGCGCGCTC ATTCTCGAGG TGATCGCCAA CGTCATGGTC
CTTTCGGACA TGGTCTCGGA ATACCTCGTC GCCGCCGTGC AGGGCACGAT CATCATCATC
GCCATGCTGG CGCACCGCTT TACCGCCAAC CGCTGA
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| Protein sequence | MIAATATIVP AEEGTRIRWA DLAPFIALAA IVLFGALVND NFVSSANLIN VVTRSAFVAI
IAVGATFVIS SGGLDLSVGS MMAFVTGIMI MAMNHLVPSF GDWAIPMGAG VALVVGVMCG
LLNGLIVTIG RIEPFIVTLG TMGIFRAFIT FLTDGGSLPI DRSLREAYRP VYFGSLFGIP
YPVLITFVVV MLGAFLLYKT KYGRRLTSAG SNVEVARFSG VNVSGVRTVA YVIQGVCVAV
AAICYVPRLG AATPTTGQLW ELQVITAVVI GGTLLRGGRG RIGGTVAGAL ILEVIANVMV
LSDMVSEYLV AAVQGTIIII AMLAHRFTAN R
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