Gene Smed_5257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5257 
Symbol 
ID5319559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp217186 
End bp217848 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID640777034 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001313966 
Protein GI150377371 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.619423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATGGGC GATATAGTAT GAGCGAACTG ATAGTTTGGA CATATGATTG GGTGCCCGAA 
GGACCCCGTG GTTTCGTGCG CGATATACGA CTGAGATGGG CCTGCGAGGA AGCTGGGCTT
GGTTATTCGG TTCGAACGGT ACCTTTCAGC GGGCGGGGGA TCGAACATCT GGCGCGTCAG
CCCTTCGGTC AGGTCCCGTT CCTGAGCGAT GGCGAGCTTG AGCTATTCGA GAGCGGCGCG
GGGCTCCTGC ATCTCGCCCG GAAGAGCGAA AAACTCATGC CGCGCGATCC GGTCGGAGAG
GCTCAAACGC TGCAATGGAC GATCGCCGCG CTCAACTCGC TCGAGATGGT CACAGTCCCC
TGGTGGTTTC TGGAAGTGAC CGGTGCAAAG GACAATCATC TCACCGGCTG GCTGGAAAGC
CGCCTCGGTC ACATGGAGAA CGTGCTGAAA GAGCGGGAAT GGCTGGCGGC CGACCGCTTC
ACCGTTGCAG ACCTGCTGAT GGCCGATGTC CTCCGGGTCG CGAAAGTCCG CTCTTTCGGA
GCGCGACCGG CGACGGAATC CTATGTGACC CGGATTACGG ATCGCCCCTC GTTCAAGAAG
GCACAGGCCG ATCAGGTTGC CCACTTCGCT GCGGCTGACA AAGCGCGCTC GAGGCAGGCT
TGA
 
Protein sequence
MDGRYSMSEL IVWTYDWVPE GPRGFVRDIR LRWACEEAGL GYSVRTVPFS GRGIEHLARQ 
PFGQVPFLSD GELELFESGA GLLHLARKSE KLMPRDPVGE AQTLQWTIAA LNSLEMVTVP
WWFLEVTGAK DNHLTGWLES RLGHMENVLK EREWLAADRF TVADLLMADV LRVAKVRSFG
ARPATESYVT RITDRPSFKK AQADQVAHFA AADKARSRQA