Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5257 |
Symbol | |
ID | 5319559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 217186 |
End bp | 217848 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777034 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001313966 |
Protein GI | 150377371 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.619423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATGGGC GATATAGTAT GAGCGAACTG ATAGTTTGGA CATATGATTG GGTGCCCGAA GGACCCCGTG GTTTCGTGCG CGATATACGA CTGAGATGGG CCTGCGAGGA AGCTGGGCTT GGTTATTCGG TTCGAACGGT ACCTTTCAGC GGGCGGGGGA TCGAACATCT GGCGCGTCAG CCCTTCGGTC AGGTCCCGTT CCTGAGCGAT GGCGAGCTTG AGCTATTCGA GAGCGGCGCG GGGCTCCTGC ATCTCGCCCG GAAGAGCGAA AAACTCATGC CGCGCGATCC GGTCGGAGAG GCTCAAACGC TGCAATGGAC GATCGCCGCG CTCAACTCGC TCGAGATGGT CACAGTCCCC TGGTGGTTTC TGGAAGTGAC CGGTGCAAAG GACAATCATC TCACCGGCTG GCTGGAAAGC CGCCTCGGTC ACATGGAGAA CGTGCTGAAA GAGCGGGAAT GGCTGGCGGC CGACCGCTTC ACCGTTGCAG ACCTGCTGAT GGCCGATGTC CTCCGGGTCG CGAAAGTCCG CTCTTTCGGA GCGCGACCGG CGACGGAATC CTATGTGACC CGGATTACGG ATCGCCCCTC GTTCAAGAAG GCACAGGCCG ATCAGGTTGC CCACTTCGCT GCGGCTGACA AAGCGCGCTC GAGGCAGGCT TGA
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Protein sequence | MDGRYSMSEL IVWTYDWVPE GPRGFVRDIR LRWACEEAGL GYSVRTVPFS GRGIEHLARQ PFGQVPFLSD GELELFESGA GLLHLARKSE KLMPRDPVGE AQTLQWTIAA LNSLEMVTVP WWFLEVTGAK DNHLTGWLES RLGHMENVLK EREWLAADRF TVADLLMADV LRVAKVRSFG ARPATESYVT RITDRPSFKK AQADQVAHFA AADKARSRQA
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