| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5242 |
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| Symbol | |
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| ID | 5319544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 204626 |
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| End bp | 205705 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777019 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001313951 |
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| Protein GI | 150377356 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.713524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.477551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGCCT GCCGGCGCGG CCGGCCGGTT CCCCGTTTCC CAAAGATCGA GTGCCAGACC
GTGACACCTG TCCTAGCCGA AAGTGCCGCG CCCCGCTCGC GGACCCAGAG ACAATCCATC
CTCAAGCAGA TCATGGGCAT GCCGGCGGGA GCGATCTTTC TCGTCTTCAT GACCCTGCAG
ATCGTCTGCA TCACTGGTGC GCTCCTCTAC CCGGATGAGT TCCGTTATCT CTCGCCGCAG
AACCTGACGA TCCTGATGAA GGCGATTCCC GTGCTCGGAT GCCTCGCGCT GGGAGCCGGC
GTATTGATGA TCGCCGGTGA ATTCGACCTT TCCATAGGCT CCGTCTACAC GTTCACGGCC
GTGCTGATGG CCTCGCTCGT CAATACCGGG CTGAGCGCCT TCATCGCAGC ACCGATCGGT
ATTCTGACCG GCCTGCTGAT CGGTTCCCTC AACGGCCATA TCACCCTGCG CTTCGGCCTG
CCGTCCTTCA TCGTTACACT CGGCGGGCTC CTCTTCTGGC GCGGCGCGGT GCTGCTCTAC
AACGGTGCCG TCCAGGTGCG GTTCGACCCG GAGCCGGTGT TCACCAGCCT CTTTTCCGGC
ACCCTGTTCG GCATAAACGC CGCCTTCATC TGGATCGTCC TCTTCGTCGT CGGCTTTCAC
CTGCTGCTCC ACCGCCACCG CTTCGGAAAC CACGTCTTCG CGACGGGTGG CAATCGCGGT
GCGGCCGAGG CGATCGGCAT CAACACCAGC CGCGTCAAGC TGATTGCCTT CGCGATTGCG
GGCGGCATGG CAGCGGTCGC GGGCATTCTT GCCACGGCCC GCGTCGGCAG TGTGCAGCCT
GGGCAGGGTG CGGGTCTGGA ACTCCAAGCG ATCGCCGCCT GCGTCATCGG CGGCCTGTCG
CTGCGCGGAG GACGCGGGTC GATCATCGGC ATCTTTCTCG GCGTGCTGCT CATCCACACC
ATTACCGACG TCCTGCTCCT CTTGCGGGCG CCGGGCTTCT ATCTCGACAT GTTCATCGCC
ACGCTGATCG TGCTGGCCGC CATTTTCAAC CATCTCATCG AGCGGCGAGG TCTTGCGTGA
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| Protein sequence | MGACRRGRPV PRFPKIECQT VTPVLAESAA PRSRTQRQSI LKQIMGMPAG AIFLVFMTLQ
IVCITGALLY PDEFRYLSPQ NLTILMKAIP VLGCLALGAG VLMIAGEFDL SIGSVYTFTA
VLMASLVNTG LSAFIAAPIG ILTGLLIGSL NGHITLRFGL PSFIVTLGGL LFWRGAVLLY
NGAVQVRFDP EPVFTSLFSG TLFGINAAFI WIVLFVVGFH LLLHRHRFGN HVFATGGNRG
AAEAIGINTS RVKLIAFAIA GGMAAVAGIL ATARVGSVQP GQGAGLELQA IAACVIGGLS
LRGGRGSIIG IFLGVLLIHT ITDVLLLLRA PGFYLDMFIA TLIVLAAIFN HLIERRGLA
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