| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5235 |
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| Symbol | |
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| ID | 5319537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 194902 |
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| End bp | 196740 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777012 |
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| Product | citrate transporter |
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| Protein accession | YP_001313944 |
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| Protein GI | 150377349 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCGA TCGCCTATAT TGCCGCAATT GTCGCTCTGA CCGTCATTCT GTTCGTGTCG
AACAAGCTGC CGGTGGTTTT GGTCGCGATG ATGACCGCCC TGGCGCTCTG GGCGAGCGGC
GTATTGACGA TCGAGCAGGC GCTCGGAGGG TTTGGTGATC CCGCCGTCAT CTTCATCGCT
TCGCTTTTCG TGATCAGCGC AGGTCTCGAG ATAACGGGGG TGACCGCCTG GGCGGGACAG
CTCCTGATAC GCGGAGCAGG CAAGGAAAGC AGGACCCGGC TGCTGGTGCT GACCATGGGC
TTGGTAGCGC TCCTCACCGC GCTCATCAGC GTCAACGGCG CCGTTGCAGC ACTGCTGCCC
GTGGTGGTGG TGATCGCCGT CAGGCTGAAG CGGTTTTCAT CGCAGCTTCT CATGCCTCTG
GTGTTCGCCG CACACGCTGG ATCAAAGCTC GCCCTCACCG GTTCCCCCGT GAACGTACTG
GTGTCGGACG CCGGCTACGA CGCGGGCGTG GGTGCGTTCG GCTTTTTCGA ATTCGGCCTT
GTCGGTCTTC CTCTGCTTGC CGGAACAGTG GCGATAATCA TCCTCTTTGG CCGCCATCTG
CTTCCGGAAC GAAACGGGGC CGCAATGCCT GCCGACTTCA GCCGACACGC CAAGACGCTT
GTCGAGCAAT ATGGGCTGGA GAGCGGCATT CATCAGATGC GGGTGCGGGC GACCTCTGCC
TATGTTGGCG CGCCGGCTTC GTCTATCGAT CTCTCCGGGA CCGCCAACCT TCAACTCGTT
GCCGTGCAGG ACGGCGAAAC GGGCGGGCCG CTGCATAGAG CTGCCATCGC GGAAGGCGAC
TACGTCTTGG TGCGGGGCGA CAACGATGCC GTGGCGCGTC TTGCCGCCGA CACGCATCTC
GCCTTCCGGG AGAAGACCGG ATCGTCCAGC GGGGAGGATA TGCTCTTCAA TCGCAGATCG
GGCCTTGCGG AGGTGGTCAT TCCGCCCCGC TCGGGCCTTA TCGGAAGAAA GGTCTTTCCC
GGCATGGTCA CAGAAAGCGG TGATCTCATC GTTCTCGCCG TTCAAAGAGG CGGAAACCAG
ATCGGCGACG CCGAGGGTGG AGGCGGACGC TCGGGCGGAA CGACTTTGCA GGCCGGAGAC
ACGATGCTGC TGCAAGGCAC CTGGAAAGCA CTGGATGTTC ACCTTGACGA CCCGGATGTC
CTGGTCGTGA GCTCGCCGGA ACTCGTTCGG CGTCAGGCGG TTCCCATGGG TCCGGGGGCA
TGGCAAGCCA TCGTCGTCCT GATCGTAATG GTGCTCCTGC TCGCAACCGG AATAGTGCCT
CCAGCCGTTG CCGGCCTTCT TGCTGCCGGC GCGATGATCC TCGCCGGGAT CATGACGGTC
GAGCAAACGT ATCGGGCGAT CGGATGGACG ACCGTGATCC TGGTTGGGGC AATGATGCCG
CTCTCCACAG CGATGGTGGA GACGGGCGCG GCAAAGCTCA TGGCCGAGCA GCTCGTCGAT
CTCGTCGGCG ATGCCGGGCC TGTCGCTCTT CTGGCGGGCC TCTTCGTCAT GACCGCCGTT
CTGGGCCAAC TGATCAGCAA TACGGCGACG GCCCTCATTA TCATTCCTAT TGGGGTAGCC
GCAGCGACGA CCATGGGGGT ATCGCCTCGC CCGGTTCTCA TGAGCACGTC CGTTGCGGCG
GCGGCAGCAT TCCTGACGCC GATCGCAACA CCGACGAACC TGATGGTCAT GGGTCCCGGA
GGCTATGCGT TCAGCGATTA TTGGAAGCTC GGCCTACCTC TACTGATGTG GTTCTTCGTC
GTCTCGGTAT TCGTCGTTCC CCTGATATGG CGCTTCTAG
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| Protein sequence | MSPIAYIAAI VALTVILFVS NKLPVVLVAM MTALALWASG VLTIEQALGG FGDPAVIFIA
SLFVISAGLE ITGVTAWAGQ LLIRGAGKES RTRLLVLTMG LVALLTALIS VNGAVAALLP
VVVVIAVRLK RFSSQLLMPL VFAAHAGSKL ALTGSPVNVL VSDAGYDAGV GAFGFFEFGL
VGLPLLAGTV AIIILFGRHL LPERNGAAMP ADFSRHAKTL VEQYGLESGI HQMRVRATSA
YVGAPASSID LSGTANLQLV AVQDGETGGP LHRAAIAEGD YVLVRGDNDA VARLAADTHL
AFREKTGSSS GEDMLFNRRS GLAEVVIPPR SGLIGRKVFP GMVTESGDLI VLAVQRGGNQ
IGDAEGGGGR SGGTTLQAGD TMLLQGTWKA LDVHLDDPDV LVVSSPELVR RQAVPMGPGA
WQAIVVLIVM VLLLATGIVP PAVAGLLAAG AMILAGIMTV EQTYRAIGWT TVILVGAMMP
LSTAMVETGA AKLMAEQLVD LVGDAGPVAL LAGLFVMTAV LGQLISNTAT ALIIIPIGVA
AATTMGVSPR PVLMSTSVAA AAAFLTPIAT PTNLMVMGPG GYAFSDYWKL GLPLLMWFFV
VSVFVVPLIW RF
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