| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5230 |
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| Symbol | |
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| ID | 5319532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 189177 |
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| End bp | 190178 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777007 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001313939 |
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| Protein GI | 150377344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.419907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGAT TCCAATTGAC TCGCCGAACG GTTCTCGCCT CGGGCGCTGC GTTGATAACG
GCTCCGGCGG TGACCGGTCT TTTCCCGTCG GCGACACTCG CGGCCGGAAT GCCACTCGGC
CCTTCAACCC CTACGCACTA TCGCTTCAAG CTAGGTGACT TCGAGGTGAC AAACATTCTC
GATGCCGGCG CCGTACTCGA TGGACCGTGG CCGATTGTCG GGGAAGATCG ACCGAAGCGC
GAGATCGAAC AACTGATGTG GCAAAGCCTG CTTCCTGAAA GGAAGTTTCA GCCGGGCTTT
ACCCCCACTA TCGTGAACAC CGGCAAAGAG CTCGTGCTTT TCGATACCGG CAACGGCGCA
AACGGCTTCG TGCCGCGGCC CGATGGCGGC TGGCTTGCAA ACCTGTTGCG CCCAGCCGGA
TTCACACCCG AACAGATTGA CCTCGTGGTC CTCACGCATG CGCATGCGGA TCATATCGGT
GGCCTGATGG AGAATGGGAA ACCGCTATTC CCGAACGCGC GATATGCGAT TGGAGACCTG
GAGTTTGACT TTTGGTCGTC CAAAGATCGT CTCGCTGCGG CCCCGGGCGA CAATGAATAT
GTGTCCGCCA CTGTCTTTGC GAAAAATGTC GTGCCCTTGG CAGACCGCAT GAGCTTCATC
AAACCGGGTG CCGAGGTTGC TCCCGGCATT CGCGCCGTCG AGGCCTATGG GCATACTCCC
GGCCACCTGG CCTTTCACAT CGAAAGTCAA GGCAAGCAGC TGTTCGTGTG GGGCGATTGC
GCGCACCATG AAGTGGCATC GCTGGCGCAT CCCGAGTGGC ATGCTTTCTT CGATATGGAC
AAGACCACAG GCGCCGAGAC CCGGCGGCAT ATTTATGACA TGGTTGCGAC CGATCGGCTT
CCCGTCGTTG GCTATCACAT GTCATTCCCT TCCCTCGGGT TTGTTGAGAG GAAGGATCGA
GGCTACCGCT GGCTTCCGAT TTCCTATCAA CTCAATGTTT AG
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| Protein sequence | MLRFQLTRRT VLASGAALIT APAVTGLFPS ATLAAGMPLG PSTPTHYRFK LGDFEVTNIL
DAGAVLDGPW PIVGEDRPKR EIEQLMWQSL LPERKFQPGF TPTIVNTGKE LVLFDTGNGA
NGFVPRPDGG WLANLLRPAG FTPEQIDLVV LTHAHADHIG GLMENGKPLF PNARYAIGDL
EFDFWSSKDR LAAAPGDNEY VSATVFAKNV VPLADRMSFI KPGAEVAPGI RAVEAYGHTP
GHLAFHIESQ GKQLFVWGDC AHHEVASLAH PEWHAFFDMD KTTGAETRRH IYDMVATDRL
PVVGYHMSFP SLGFVERKDR GYRWLPISYQ LNV
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