Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5230 |
Symbol | |
ID | 5319532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 189177 |
End bp | 190178 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640777007 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001313939 |
Protein GI | 150377344 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.419907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGAT TCCAATTGAC TCGCCGAACG GTTCTCGCCT CGGGCGCTGC GTTGATAACG GCTCCGGCGG TGACCGGTCT TTTCCCGTCG GCGACACTCG CGGCCGGAAT GCCACTCGGC CCTTCAACCC CTACGCACTA TCGCTTCAAG CTAGGTGACT TCGAGGTGAC AAACATTCTC GATGCCGGCG CCGTACTCGA TGGACCGTGG CCGATTGTCG GGGAAGATCG ACCGAAGCGC GAGATCGAAC AACTGATGTG GCAAAGCCTG CTTCCTGAAA GGAAGTTTCA GCCGGGCTTT ACCCCCACTA TCGTGAACAC CGGCAAAGAG CTCGTGCTTT TCGATACCGG CAACGGCGCA AACGGCTTCG TGCCGCGGCC CGATGGCGGC TGGCTTGCAA ACCTGTTGCG CCCAGCCGGA TTCACACCCG AACAGATTGA CCTCGTGGTC CTCACGCATG CGCATGCGGA TCATATCGGT GGCCTGATGG AGAATGGGAA ACCGCTATTC CCGAACGCGC GATATGCGAT TGGAGACCTG GAGTTTGACT TTTGGTCGTC CAAAGATCGT CTCGCTGCGG CCCCGGGCGA CAATGAATAT GTGTCCGCCA CTGTCTTTGC GAAAAATGTC GTGCCCTTGG CAGACCGCAT GAGCTTCATC AAACCGGGTG CCGAGGTTGC TCCCGGCATT CGCGCCGTCG AGGCCTATGG GCATACTCCC GGCCACCTGG CCTTTCACAT CGAAAGTCAA GGCAAGCAGC TGTTCGTGTG GGGCGATTGC GCGCACCATG AAGTGGCATC GCTGGCGCAT CCCGAGTGGC ATGCTTTCTT CGATATGGAC AAGACCACAG GCGCCGAGAC CCGGCGGCAT ATTTATGACA TGGTTGCGAC CGATCGGCTT CCCGTCGTTG GCTATCACAT GTCATTCCCT TCCCTCGGGT TTGTTGAGAG GAAGGATCGA GGCTACCGCT GGCTTCCGAT TTCCTATCAA CTCAATGTTT AG
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Protein sequence | MLRFQLTRRT VLASGAALIT APAVTGLFPS ATLAAGMPLG PSTPTHYRFK LGDFEVTNIL DAGAVLDGPW PIVGEDRPKR EIEQLMWQSL LPERKFQPGF TPTIVNTGKE LVLFDTGNGA NGFVPRPDGG WLANLLRPAG FTPEQIDLVV LTHAHADHIG GLMENGKPLF PNARYAIGDL EFDFWSSKDR LAAAPGDNEY VSATVFAKNV VPLADRMSFI KPGAEVAPGI RAVEAYGHTP GHLAFHIESQ GKQLFVWGDC AHHEVASLAH PEWHAFFDMD KTTGAETRRH IYDMVATDRL PVVGYHMSFP SLGFVERKDR GYRWLPISYQ LNV
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