| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5229 |
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| Symbol | |
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| ID | 5319531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 188138 |
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| End bp | 189061 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777006 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313938 |
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| Protein GI | 150377343 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC CCGGCCAGCC GACGCTGGAT CAGCTCAAGG TGTTCATTAC CGTTGTCGAG
ACAGGCAGCT TCGCGGCCGC CTCTCGCAAA TTAAATCGGG CAACATCGGT GATCAGCTAC
ACGATCGCCA ATCTCGAAGC GCAGTTGGGG GTCACGCTTT TCGACCGGCT ATCGACGAAG
AAACCGCAGC TGACTTTAGA GGGCCGGACG GTTCTCGCCG AGGCAAAGAG CGTCGCCCAT
GGAATCGATA ATCTTCGAGC AAAGGTGAAA AGCATGCTCC GCGGCGTTGA GCCGGAGGTT
CACCTCGCGC TCGACGTCAT GCTTCCTGCC GCCCGTGTCA TGGACGCGCT AAAGGCGTTT
CGGAAGGAAT TTCCGAGCGT CTCCCTTCGC CTCTATGTCG AAGCCTTGGG AGCGGTCACC
CAGATCGTGC TCAACCGAAC CGCTGCGATC GGTATTAGTG GGCCTCTCGA TATCGAGATA
GCCGGACTTG AACGTATCGG GGTGGGTTTT GTCAAACTCA TTCCGGTGGC TTCACCCGAC
CATCCTTTGG CGGGCGGGTC CCATCCGCCA GGCGCAGCGC GGGGACATAT CCAGCTCGTC
CTGACCGACA GGTCACCCCT TACCCAGGGC CACGAGTTCG CGGTGGTCGG CAACCACACT
TGGCGGCTCG CCGATCTCGG CGCCAAGCAC ATGCTGCTCA AGGAGGGTAT AGGTTGGGGC
AACATGCCGG AACCTATGGT GCGCGATGAC ATCGAGGCAG GCCGTCTGGT GCAGCTTGAT
CTTCCCGATT GCAAAGGCGG CCCCTATCGC CTTCAGGCCG TCTATCGTAC CGACACGCCT
CCCGGTCCCG CCGCCCGTTT CCTGATCGAC CACTTCCAGA GCCAGGATGT TGACGATCCT
ATTTCAGCCG GCTTTGGAGA ATAG
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| Protein sequence | MSDPGQPTLD QLKVFITVVE TGSFAAASRK LNRATSVISY TIANLEAQLG VTLFDRLSTK
KPQLTLEGRT VLAEAKSVAH GIDNLRAKVK SMLRGVEPEV HLALDVMLPA ARVMDALKAF
RKEFPSVSLR LYVEALGAVT QIVLNRTAAI GISGPLDIEI AGLERIGVGF VKLIPVASPD
HPLAGGSHPP GAARGHIQLV LTDRSPLTQG HEFAVVGNHT WRLADLGAKH MLLKEGIGWG
NMPEPMVRDD IEAGRLVQLD LPDCKGGPYR LQAVYRTDTP PGPAARFLID HFQSQDVDDP
ISAGFGE
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