Gene Smed_5226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5226 
Symbol 
ID5319528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp185661 
End bp186272 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID640777003 
ProductTrpR binding protein WrbA 
Protein accessionYP_001313935 
Protein GI150377340 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID[TIGR01755] NAD(P)H:quinone oxidoreductase, type IV 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG TTCTCGTTCT CTACTACTCT TCCTACGGCC ATATCGAAAC CATGGCCGCT 
GCAATCGCTG AAGGCGCAAG AAGCGCCGGC GCCGAGGTCA CGATCAAGCG CGTCCCCGAG
ACGGTCCCGC TCGACGTTGC CGATAAGGCC CACTTCAAGA TCAACCAGGC TGCGCCGGTC
GCGACCGTGG CAGAATTAGC CGACTACGAC GCGATCATTG TCGGCACCGG CACACGCTTC
GGCCGCATGT CTTCACAATT GGCAGCCTTC CTCGACCAGG CCGGCGGCCT GTGGGCGCGC
GGAGCCCTGA ACGGCAAGGT CGGCGCGGCT TTCGTTTCGA CCGGCACGCA GCATGGCGGT
CAGGAAACAA CCCTGTTCTC CGTCATCACC AATCTTATGC ACTTCGGCAT GGTCATCGTC
GGTCTTCCTT ATAGTCACCA GGGCCAGATG AGCATGGACG AAATCGTTGG CGGCGCTCCC
TATGGCGCAA CAACGATTGC CGGTAGCGAC GGCTCCCGTC AGCCTTCGCA GATCGATCTT
GCAGGTGCCT ATCATCAGGG CGAGATCGTC GCTCGCACCG CAGCCGCACT CGCTGCTGCT
CACGCCGCAT AG
 
Protein sequence
MTKVLVLYYS SYGHIETMAA AIAEGARSAG AEVTIKRVPE TVPLDVADKA HFKINQAAPV 
ATVAELADYD AIIVGTGTRF GRMSSQLAAF LDQAGGLWAR GALNGKVGAA FVSTGTQHGG
QETTLFSVIT NLMHFGMVIV GLPYSHQGQM SMDEIVGGAP YGATTIAGSD GSRQPSQIDL
AGAYHQGEIV ARTAAALAAA HAA