| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5203 |
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| Symbol | |
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| ID | 5319505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 163540 |
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| End bp | 164544 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640776981 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001313913 |
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| Protein GI | 150377318 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.789532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCA ATCTCCGAAA TCGCTCGCTT CTGACCGTGC AGGACTACAC ACCGCGGGAG
TTTCGTTATC TCGTAGATCT CGCCCGCGAT CTGAAGCGCG CGAAATATGC GCGGACCGAA
CAAGAACATT TGAAAGGCAA GGAAATCTGC CTGATCTTCG AAAAGACATC GACGCGTACA
AGATGCGCAT TCGAAGTGGC CTGCTCGGAT CAAGGCGCTA ATGTTACCTA TCTTGACCCT
GCCGGATCGC AGATCGGGCA CAAGGAGTCT TTCAAGGACA CCGCCCGCGT ACTGGGCCGC
ATGTACGACG CCATCGAATA CCGCGGCGCC TCACAAGCTG GTGTGGAGAC TCTCGCGAAA
TATGCGGGTG TGCCGGTCTA CAATGGCCTC ACCGACGAGT ATCATCCCAC GCAGATGATC
GCCGACGTCA TGACTATGCG CGAGCATAGC GACAAGCCGA TCAGCGAAAT CAAGTACGCC
TATATCGGCG ACACCCGATC GAACATGGGT CATTCTCTGC TCATCGTCGG CTGTTTGATG
GGGATGGATG TGCGCATATG CGGTCCCCGA TCTCTGTGGC CGTCGGAAGA ATACCAGACT
ATCGCCAAAG AACTTAAGGC TCAGTCCGGC GCGCGCCTCA TGATTACGGA CGATCCGAAG
GCAGCAGTGG AGGGAGTTGA CTTCATTCAC ACGGACGTCT GGGTTTCGAT GGGTGAGCCG
AAGGAGGTCT GGAAAGAACG CATTCAGTTG CTTACGCCCT ATCAGGTCAA TGCCGAGTTG
ATGGCCGCAA GCGGCAACCC GCAAACCAAG TTCATGCATT GCCTCCCGGC CTACCACGAT
ACCGAGACCG CTATCGGAAA GCAGATTTCC GAGGACTACG GGATGTCGAA TGGTCTTGAG
GTCACCGACG AAGTGTTCGA GTCGCAAGCG AACGTAGCAT TCGAACAGGC CGAGAATCGC
ATGCATACGA TCAAGGCACT GCTGGTTGCA ACCCTGGGAG ACTGA
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| Protein sequence | MSFNLRNRSL LTVQDYTPRE FRYLVDLARD LKRAKYARTE QEHLKGKEIC LIFEKTSTRT
RCAFEVACSD QGANVTYLDP AGSQIGHKES FKDTARVLGR MYDAIEYRGA SQAGVETLAK
YAGVPVYNGL TDEYHPTQMI ADVMTMREHS DKPISEIKYA YIGDTRSNMG HSLLIVGCLM
GMDVRICGPR SLWPSEEYQT IAKELKAQSG ARLMITDDPK AAVEGVDFIH TDVWVSMGEP
KEVWKERIQL LTPYQVNAEL MAASGNPQTK FMHCLPAYHD TETAIGKQIS EDYGMSNGLE
VTDEVFESQA NVAFEQAENR MHTIKALLVA TLGD
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