Gene Smed_5200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5200 
Symbol 
ID5319502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp159153 
End bp160103 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content58% 
IMG OID640776978 
Producthypothetical protein 
Protein accessionYP_001313910 
Protein GI150377315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0575835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA TCTTGCACAC ACTTCTCCTG GGATCGGCGA TCTCGCTTGC GCCCGTCGTT 
GGCCCGATAG ACGCATCTTT CGCCCAGACA CAGGATTTGG CAGACCTGGA GGATTATGCT
GCTGCGGAAG ATCCGCCAAT CTTCGATGAT CCGTCGAAGG CGGTGGAAGC ATTCAAATCG
GTCCTTGCCG CCAACGACTT CGATGGGCTT GCACGACTTC TGGGGCTGAA CGCCGCAAAA
CTGAAGACGG GCGAAGGAGC GATGGAGACC TTCAATCTGG TTCGAGAAGG TGCGGCCCGC
AACATCGTCG TGCGCGATCT TGACGACCGC AAGATCATCG TCATCGGCGA CCGGCTCTGG
CCACTGCCGT TTCCGCTCGC CAAGGACGAG GGCGGCAAAT GGGCTTTCGA CACCTATGTC
GGACTGGAGG AGATTGTCAA CCGACGCGTT GGCGAGAACG AACTGGAGGC GATCGAGACC
GCGCGCGCCT ATATCGAGGC GCAGAAGGAT TATGTATCGC AGGACCGCGA TGGGGACGGA
GTTTTCGAAT ACGCCCAGAA GCTGATCAGC AGCCCGGGCC AGACGGATGG GCTTTACTGG
CCGGCAGATC AGGGGAACGG CGAAAGCCCG GTCGGTGAGG CCATCAGCGA GGCGGCGCTC
GAGAAGGCAA GGACTGGAGA GGGCTATTAC GGATACCGCT TTCGGATCCT GACCTCTCAA
GGCGAGAATA TCGCCGGCGG CAAATACGAT TACACCATCA ACGGCAACAT GATCGCCGGC
TTCGCGCTGG TCGCCTGGCC GGTCAACTAT GCCGAAACAG GGGTCAAGAC CTTCGTCATC
AATCAGCAGG GCATCGTCTA TGAACGAGAC CTTGGTCCGA GCACCGGGGA AATCGTGCCA
TTCATAGATC GTTTCGATCC GGATGAAAAA TGGAGCGTGG TTACCGACTA G
 
Protein sequence
MIKILHTLLL GSAISLAPVV GPIDASFAQT QDLADLEDYA AAEDPPIFDD PSKAVEAFKS 
VLAANDFDGL ARLLGLNAAK LKTGEGAMET FNLVREGAAR NIVVRDLDDR KIIVIGDRLW
PLPFPLAKDE GGKWAFDTYV GLEEIVNRRV GENELEAIET ARAYIEAQKD YVSQDRDGDG
VFEYAQKLIS SPGQTDGLYW PADQGNGESP VGEAISEAAL EKARTGEGYY GYRFRILTSQ
GENIAGGKYD YTINGNMIAG FALVAWPVNY AETGVKTFVI NQQGIVYERD LGPSTGEIVP
FIDRFDPDEK WSVVTD