| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5193 |
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| Symbol | |
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| ID | 5319495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 148533 |
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| End bp | 149474 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776971 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313903 |
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| Protein GI | 150377308 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.441941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCG CACCGGGCAA AGGACGTCAA ACGGGACGAC GGATAGTCAG ATTTGGGCTG
ACGCTAGGAG CAGTGACCGT CAGCATGTGG GCGACCGCAG AAGCACAGAC GCTCGATCGC
GTCCGCAGCA GCAGCACCGT CAAGCTGGGC TACGATGCGA CCGCGCGGCC ATTCTCTTTC
AAGGCCGAAG GAGAAAGCGC CACCGGCTAC GCCGTCAGCC TGTGCATGGA GGTGACCGAG
GAATTGAAAC GTGAACTTGG GATTGCCGAT CTTGCGGTCG AGTGGATTGA GCTCACCAGG
GATGCTGCCG ACAACGCCAT ACGACAAGGT TCGGCCGATC TCTTCTGTGG TGCGTCGCCC
GTGACCTTGA CGCGCCGAAA GGAGGTTTCG TTCTCGATAC CGATCTTTCC GAGCGGAACG
GGTGCGGTAC TGAGTGCGAG CGCACCACTT GCGTTGCGTG AGGTTCTGAC GCAGGGACGC
CCTTCTGACC GGCCGATTTG GCGGGGGTCC CCCGCAAGAA CCGTGCTCAA TCAGAAGACA
TTTTCCCCGA TCGCAGGTAC TACCAGTGAG GATTGGCTTG CGGAGCGGAT AAAGACGTTT
CAGCTTTCAG CGACCATCGC TGCTGTGGAG AACTATGATC AGGGAATCGC CAATATTCTC
AACGGCGAGT CCGACGTACT CTTCGGCGAC CTGCCGCTCT TGCTCGACGC CGCCGCGCGC
GGCGAAAATT CCGGCGATCT CATCGTACTG AAGCGCCATT TCACCTACGA ACCGCTTGCG
CTTGTGCTGG CGCGCAATGA CGAGGATTTT CGAATCGTCG TTGACCGAGC CTTGAGCCGC
ACCTACCGAT CGGAAGATTT CCCGGCATTC TTCAGCGAGT GGTTCGGACC TCCTGACGAT
ACGATCGTGA CCTTCTTCCG GCAAACGACC CTGCCTGAGT GA
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| Protein sequence | MQAAPGKGRQ TGRRIVRFGL TLGAVTVSMW ATAEAQTLDR VRSSSTVKLG YDATARPFSF
KAEGESATGY AVSLCMEVTE ELKRELGIAD LAVEWIELTR DAADNAIRQG SADLFCGASP
VTLTRRKEVS FSIPIFPSGT GAVLSASAPL ALREVLTQGR PSDRPIWRGS PARTVLNQKT
FSPIAGTTSE DWLAERIKTF QLSATIAAVE NYDQGIANIL NGESDVLFGD LPLLLDAAAR
GENSGDLIVL KRHFTYEPLA LVLARNDEDF RIVVDRALSR TYRSEDFPAF FSEWFGPPDD
TIVTFFRQTT LPE
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