Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5187 |
Symbol | |
ID | 5319489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 141991 |
End bp | 143136 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640776965 |
Product | hypothetical protein |
Protein accession | YP_001313897 |
Protein GI | 150377302 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.503723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA ATCCATCATC CCAACGAAAC CCGGACCCGG TTAATCCCGC CGCGCGGCCG TCTATCGAGC CGAGAATAAC CGAGATCGCA CGGATCGGCC TGGTTGGACT TTTCGCCTAC TGGTCTCTGA CCTTGATCGC GCCATTTGCG ATTATTCTTA TTTGGGCCGC GATCCTGGCT GTAGCCCTTT ATCCGGCCTA TACTGCGCTT TCAGCTGTCC TCGGCCACCG GCCCCGTGTG ACGGCGCTCG TCATTACAAT GCTGGGGCTG CTCGTTATCG TCGCTCCGCT CGCAGCCATT GCGATCAGCT TTGCCGAGGG CCTACAGGTG GTGCTTGCGA GGCTGAATGA TCGATCTCTT CTGATTTCGG CGCCACCCGA CAGTATTCGC AGTTTTCCGC TTATCGGCGA GCGCATCTAT TCGGTCTGGA GTATGGCTTC TGACAATCTT GAGGCCGTAT TGCAACAGAT CAAGCCTTCG CTCCTGCAAG CGGGCAGCAA GGCGCTCAGC ACAATCGCGT CGATTGGCGC CGACCTGCTC AGCTTTGTGG TTTCCGTTCT TGTCGCCGGT TTTCTCTTCG GGTCCGGAGC ACGGCTGGCA AACAGTGCGC GGGGATTCGC GAGCAGAATA GGTGGGGAGA GAGGCGTTGG CTTTTTGCAA CTGGCAGCGG CAACGATCCG CAACGTGGCG CGGGGTGTGA TCGGTGTCGC CCTCTTGCAA GCCTTTCTCT GTGTTTTGAT CCTGAGCCTT TTCAAAGTTC CTGCACCCGG TGCAATCGCC TTCGTCGTCC TTATCCTCTG CATCATTCAG ATTGGACCGG CGTTGGTTCT GCTGCCCGTG ATCGTCTGGG CGTGGACCTC GATGGAATTC GGCATGGCTG CCTTGTTTAC GATCTTGCTG ATACCGCTCC TCATCATCGA TAACGTCATG AAGCCAATCC TGGTCGCGCG CGGACTTTCC ACACCGACAC TCGTGATTTT GCTGGGTGTG CTCGGCGGCA CGCTTTCGTA CGGATTGATA GGACTTTTCC TGGGGCCGAT CGTTCTCAGC GTGTTCCACG ATTTACTGTT GATCTGGATG AGCACGGACA CCGTGGGAGC GGAAAGGCTG CGGCTGGAGC CATCGAAACT GCCGAATCCA ACCTAA
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Protein sequence | MDDNPSSQRN PDPVNPAARP SIEPRITEIA RIGLVGLFAY WSLTLIAPFA IILIWAAILA VALYPAYTAL SAVLGHRPRV TALVITMLGL LVIVAPLAAI AISFAEGLQV VLARLNDRSL LISAPPDSIR SFPLIGERIY SVWSMASDNL EAVLQQIKPS LLQAGSKALS TIASIGADLL SFVVSVLVAG FLFGSGARLA NSARGFASRI GGERGVGFLQ LAAATIRNVA RGVIGVALLQ AFLCVLILSL FKVPAPGAIA FVVLILCIIQ IGPALVLLPV IVWAWTSMEF GMAALFTILL IPLLIIDNVM KPILVARGLS TPTLVILLGV LGGTLSYGLI GLFLGPIVLS VFHDLLLIWM STDTVGAERL RLEPSKLPNP T
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