| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5175 |
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| Symbol | |
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| ID | 5319477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 131077 |
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| End bp | 132285 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776953 |
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| Product | replication initiation protein RepC |
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| Protein accession | YP_001313885 |
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| Protein GI | 150377290 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.940689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGTG GAAGTGTGAC GACGCCCTTT GGGCGGCGGT CGATGACGCT TGCCATGTTG
GCAGGCCAGT TCATCTCCCG CGAAATCGAA CCTGGGAAAT CGGTCGAGAA GTGGAAACTG
TTTCGCTCGC TTTGTGCAGC CAAACGGCAT CTGGGCATCA GTGACAGGGC GCTGGCTGTT
CTGAACGCCC TGTTGAGCTT CTATCCCGAG AACACGCTTA GCGAAGAAAC CGGCCTGATA
GTTTTCCCCT CGAACCTCCA GCTTTCGCTG AGAGCCCATG GAATGGCCGA GGCAACACTC
AGAAGGCACC TCGCCGCACT CGTCGATGCC GGACTTGTTG CCCGTAAGGA CAGCCCGAAC
GGCAAACGCT ATGCCCGCAA GACGCGCGAT GGAGCGATCG GCACCGCATT CGGCTTTTCA
CTGGCTCCGC TTTTGGCCCG ATCCACCGAA ATCGAGCAGC TCGCAGCCAA AGCCGAGGCC
GATCGGCTCG AATTGCAGCG GCTGCGCGAG CGGCTGACGC TTTGCCGTCG AGACATTGCC
AAACTGATCG ACGTGGTGGT CGAAGGAGAA CTCCCGAGCG ATTGGGCAAC GGTGCAGGAG
CATTTCCGGA CCCTCGTCCA ATCAATCCCG AGAGCCCCCG GCATTGACGA CCTCACCCCC
CTGGTCGCAG CGCTCGAGAT ATTGCGCGAG CAGGTGGCTA ACCGATTGCA AATGCGCGCG
AAACCGCAAG AACTGAGCGG CAATCCCGAT CAAACTGAGC GGCACATACA GGAATCAAAA
CCTGAATCTA TTATTGAACT TGAAGCCGGC TCGGGGAATG AACCATCCAA ACATCAGCCC
ATTGCACCAG CCAGTGAGGC AAACAGGATC TTCCCGCTAG GGCTGGTACT GAAAGCCTGC
CCGGAAATCG TCAATTACGG GCCTGACGGA ACGGTACGAA GCTGGCGCGA CCTTATGATC
GCTGCTGTTA CGGTGCGCTC CATGCTCGGC GTCTATCCCT CGGCCTATCA GGAAGCCTGC
GCAGTCATGG GCACCGAAAA TGCCGCGGCG GCCATGGCCT GCATCCTCGA GCGGGCAGGG
CACATCAACT CTGCCGGCGG CTATCTGCGC GATCTGACCG CCAAAGCGAA GCAAGGGAAA
TTCTCGCTGG GCCCGATGCT CGTGGCGTTG CTGAGGGCGA ATGGCTTCGA TGTCCGGAGC
GCGTCGTGA
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| Protein sequence | MESGSVTTPF GRRSMTLAML AGQFISREIE PGKSVEKWKL FRSLCAAKRH LGISDRALAV
LNALLSFYPE NTLSEETGLI VFPSNLQLSL RAHGMAEATL RRHLAALVDA GLVARKDSPN
GKRYARKTRD GAIGTAFGFS LAPLLARSTE IEQLAAKAEA DRLELQRLRE RLTLCRRDIA
KLIDVVVEGE LPSDWATVQE HFRTLVQSIP RAPGIDDLTP LVAALEILRE QVANRLQMRA
KPQELSGNPD QTERHIQESK PESIIELEAG SGNEPSKHQP IAPASEANRI FPLGLVLKAC
PEIVNYGPDG TVRSWRDLMI AAVTVRSMLG VYPSAYQEAC AVMGTENAAA AMACILERAG
HINSAGGYLR DLTAKAKQGK FSLGPMLVAL LRANGFDVRS AS
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