| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5169 |
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| Symbol | |
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| ID | 5319471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 122720 |
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| End bp | 123661 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776947 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313879 |
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| Protein GI | 150377284 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.733103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.458682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA AGTGGCTGGA GGATTTCGTG ACGCTTGCCG ACACGTCCAG CTTCTCGCGT
GCGGCTGAGC TGCGCAACGT GACTCAACCG GCCTTCAGCC GCCGGATCAA GCAATTGGAG
AACTGGCTCG GCGCGACGCT GATCAGCCGC GCGACCATGC CGGCCGAACT CACGCCTGCC
GGGCGCAATT TCCTGCCCGT CGCCCAGGAA TCGATCCGTA CCTTCTATGC GGCGCGCGAA
GTTCTGCGTC TTCCGAATGA GCCGGGCCTC ATCCGCTTCG CCGCGCTGCA TACGCTGACT
GTCACCTTCT TTCCGCGCTG GCTGAAAAAA CTAGAGGCTG CGGGCGGGAC ATTCAGCACC
TCGCTCATTC CGGACCGAGG TGGCATCGAG GCCAACCTCG ACGCACTCAT TGGCGACGAG
GCGGATTTCT TCCTCACCTA TGCCCATGCG GAAGTGCCGT TCCATCTCGC CCGGGGACAG
TTCGCCTCGC TGACCGTGGC CCATGACCGT TTGATCCCGC TGGTCGCAAC GGAGATCGTG
CTGTCCGGCC ATGCACAACC CGGTCGCAAC CTCCTTGACC GTGCCGTCGC CCAGCCGCGG
CTTGCCATCC CTTATCTCAG CTATGGCTTG AATTCTTTCT TTGGCGTTGC CCTTTCGCGC
CTGCTGCTGC GCCGTCCGCC ATTCCGGCGC CGCACGACAC ACGAAAACAC CATCAGCGCC
GGCTTGATGA ACATGGCATT GACGGGCGCA GGCCTGTGCT GGCTTCCGGA AAGTCTCGCG
CGTGAGGAGA TGGAGGCAGG CCGCCTCGTG CCCGCCTCTG CGGATGAAGG CTGGAACCTC
GACCTCGAGA TCCGGCTCTA CCGCCACGCG GCGGGCCGCA ACCGCAAGGT CGAGGATCTA
TGGCAGACGG CGCAGCAGCT CCTGGAGCGC TCGCCCGCTT GA
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| Protein sequence | MEIKWLEDFV TLADTSSFSR AAELRNVTQP AFSRRIKQLE NWLGATLISR ATMPAELTPA
GRNFLPVAQE SIRTFYAARE VLRLPNEPGL IRFAALHTLT VTFFPRWLKK LEAAGGTFST
SLIPDRGGIE ANLDALIGDE ADFFLTYAHA EVPFHLARGQ FASLTVAHDR LIPLVATEIV
LSGHAQPGRN LLDRAVAQPR LAIPYLSYGL NSFFGVALSR LLLRRPPFRR RTTHENTISA
GLMNMALTGA GLCWLPESLA REEMEAGRLV PASADEGWNL DLEIRLYRHA AGRNRKVEDL
WQTAQQLLER SPA
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