| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5168 |
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| Symbol | |
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| ID | 5319470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 120910 |
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| End bp | 122535 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640776946 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001313878 |
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| Protein GI | 150377283 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.54245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG GAATCGAAGC CGAGCTTATC CTTACCAATG GCCGCATCTG GCGCGGCCGG
GAGGAGGGCG TCAGCGAGGC CCTTGCCGTT TGGCAGGGCA AGGTTCTTGC AACCGGCAGC
AGTGCGGACA TATCCAACCT GAAGGGCCCG CGCACCGAAG TCATCGATCT CGAAGGCCGC
TTTGCCACCC CTGGCCTCAT CGACAACCAC CTGCATCTCA TCGCGACCGG CATGGCCATG
GGCTGGGTCG ACGCGTCGCC CGCGGCCGCG CCGACGCTCG CGGCGCTGAT GAAGCAGGTT
TCCGACCGCG CAGCCACGAC GCAAAAGGGC GGCTGGATCC GCGCCCGGGG CTATGACCAG
GTCAAGTTGG ACACCGGCCG GCACCCAACG CGCGACGATC TCGATCGCGC CGCGCCCGAT
CACCCCGTCC TGCTGACGCG CGCCTGCGGC CACGTTTCAA TCGCCAATAC CCGCGCGCTG
GAGCTCGCCG GCATCACAGA GACGACGGCG GTGCCCGAAG GGGGCGTGAT CGGGCTCACC
AATGGGTGTC TGAACGGCTT CCTGGCGGAA AACGCCCAGA ACCTGGTCAG GGCCGCCATG
CCGCCCGCAG CCACCGAAGA GCTTATCGAC GGGATCGAGC GGGCCGGAAA GCACCTGCTT
TCGTCCGGAA TCACGAGCTG CATGGATGCG GCAGTCGGCC AGGTTTCCGG TTTCGCCGAA
ATCCAGGCTT ACGAGATGGC TAAACTTTCC GGCCGTCTGC CGGTCCGCGT GTGGCTGACC
CTGCTCGGCG ACCCCGGCGT TTCCATCGTC GAGGATTGCT GGCGAGCCGG TCTTCTCTCC
GGCGCCGGCG ACGACATGCT GCGCGTCGGG GGTGTAAAGG TCTTTCTCGA CGGTTCGGCG
GGCGGTCGCA CTGCCTGGAT GACGAAGCCC TATCAGGGCG AACCGGACAA TATCGGCGTG
CAGATGCTGC CGGACGCGGA GGTCGAGGCG GTCGTCAAGG CCTGTCACGA CCGAGGGTAT
CAGATGGTCT GCCACGCCAT CGGCGACGGC GCGATCGAAC AGCTCATCAC GGCCTATGAG
AAGGCGCTTG CCGCAAACCC CGATCCAGAT CGTCGCCATC GTATCGAGCA TTGCGGCTTT
CCCGCGCCGG AACAGAATGC GCGCATGAAG GCGGCCGGCA TCTTGCCAGC ACCGCAGATG
GCCTTCATCC ACGATTTCGG CGACAGCTAC ATTTCCGTTC TCGGGGAAGA GCGAGGCTTG
CCGTCATATC CGATCGGCAC CTGGATGCGC ATGGGATTAA AACCTTCGAC CGGCTCCGAT
TCGCCCGTGT GCTCGCCCGA CCCGTTCCCG AACCTGCATG CGATGATCAC ACGCGAGACC
GGCAAGGGCA CGGTGATGCA GGCATCCGAA CGGCTGAGCC GCGAAGAGGC GTTGCAGGCC
TATACCGAAT TCGGCGCCTA TTCGCAGAAA GCCGAGGCGG TCAAGGGACG GCTTGTGCCC
GGTCAATGGG CGGACATCGC CGTCTTCGAC AACGACCTTC TGGCCGCCCC GGCCGAAACA
ATTCTCTCAG ATACCCGCTG TTTGCTCACC CTGCTTGCGG GCCGCGTCGT GCACGATGCA
CGCTGA
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| Protein sequence | MAIGIEAELI LTNGRIWRGR EEGVSEALAV WQGKVLATGS SADISNLKGP RTEVIDLEGR
FATPGLIDNH LHLIATGMAM GWVDASPAAA PTLAALMKQV SDRAATTQKG GWIRARGYDQ
VKLDTGRHPT RDDLDRAAPD HPVLLTRACG HVSIANTRAL ELAGITETTA VPEGGVIGLT
NGCLNGFLAE NAQNLVRAAM PPAATEELID GIERAGKHLL SSGITSCMDA AVGQVSGFAE
IQAYEMAKLS GRLPVRVWLT LLGDPGVSIV EDCWRAGLLS GAGDDMLRVG GVKVFLDGSA
GGRTAWMTKP YQGEPDNIGV QMLPDAEVEA VVKACHDRGY QMVCHAIGDG AIEQLITAYE
KALAANPDPD RRHRIEHCGF PAPEQNARMK AAGILPAPQM AFIHDFGDSY ISVLGEERGL
PSYPIGTWMR MGLKPSTGSD SPVCSPDPFP NLHAMITRET GKGTVMQASE RLSREEALQA
YTEFGAYSQK AEAVKGRLVP GQWADIAVFD NDLLAAPAET ILSDTRCLLT LLAGRVVHDA
R
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