| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5165 |
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| Symbol | |
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| ID | 5319467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 117419 |
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| End bp | 118240 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776943 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001313875 |
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| Protein GI | 150377280 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.609485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGG GCTTCAACTT CTGGCTCGGT GCCGGCCTGA CCGCACTGGT GGTTCTTGCC
GGCATTCTCG CCCCGTGGAT CGCCCCCTTC GACCCGGTGC TCGACGCGGA CCTGATGAAC
TCGGAGCTGC CACCGGATGC CACCTTCTGG TTCGGCACGG ACGGGCAGGG GAGGGACGTC
TATACCCGTA TTCTGTATGG TGCGCAAATT TCGCTCACGG TCGGCGTCGT CTCGCAGCTC
ATAAATTCGA TCATCGGCGT GACGCTGGGC ATGACGGCGG GCTATTGGGG CGGTTGGTGG
GACGACCTGG TCAATGGCGT CACGAACGTC ATGCTCGCAA TTCCATCGCT GATCTTCGCG
CTTGCCGTAA TGGCGGTGCT GGGTCCGGGC CTTCCTTCGC TGCTTGTCGC GCTTGGCCTC
ACCAACTGGA GCTGGACCTG CCGAATTGCA CGCTCTTCCA CGCTCTCCCT GAAATCGTTG
AGCTATGTGC AGGCGGCGCA GACGCTGGGT TACGGGGACC TGCGGATCAT GTTCACGCAG
ATCCTGCCCA ATATAATGGG GCCGATCCTT GTGATGGCGA CGCTCGGCAT GGGTTCGGCG
GTTCTTTCGG AAGCCGCTCT GTCCTTCCTT GGCCTCGGTA TCCAGCCGCC ATTCCCGAGC
TGGGGCTCGA TGCTGACGGA CGCGCGTCAG CTCATTCAGC TTGCGCCCTG GGTGGCGATC
TTTCCCGGCC TTGCCATTTT CCTCTCCGTG CTCGGCTTCA ACCTTCTCGG CGACGGCCTG
CGCGACAGCC TCGATCCGCA TATGAGGACA CGCAACCCAT GA
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| Protein sequence | MRLGFNFWLG AGLTALVVLA GILAPWIAPF DPVLDADLMN SELPPDATFW FGTDGQGRDV
YTRILYGAQI SLTVGVVSQL INSIIGVTLG MTAGYWGGWW DDLVNGVTNV MLAIPSLIFA
LAVMAVLGPG LPSLLVALGL TNWSWTCRIA RSSTLSLKSL SYVQAAQTLG YGDLRIMFTQ
ILPNIMGPIL VMATLGMGSA VLSEAALSFL GLGIQPPFPS WGSMLTDARQ LIQLAPWVAI
FPGLAIFLSV LGFNLLGDGL RDSLDPHMRT RNP
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