Gene Smed_5150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5150 
Symbol 
ID5319452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp102659 
End bp103102 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content58% 
IMG OID640776928 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001313860 
Protein GI150377265 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACA CTGTACGATT GCACCGCGTT CTGGCGACCA GCCCGGAGAA ACTCTATCGC 
GCGTTCCTCG AGGCCGACGC GCTCGCGAAA TGGCTTCCGC CGAATGGCTT TGCCTGCACC
GTGCATCATC TGGAGCCAAA AGCCGGCGGC ACCTTCAAAA TGTCCTTCCG GAACTTCACG
ACGGGTGAAA GCCACGCCTT TGGTGGTGAA TATGTCGAAC TCTTCCCCGG CGAACGTCTG
CGCTACACGG ACAAATTCGA CGACCCCAAC CTGCCCGGCG AGATGCAGGT GACCGTGACG
TTGAAGAAAG TATCGGTCGG TACCGAACTC GAGATCGTGC AGGAAGGCGT ACCCGACGTC
ATTCCACTCG AGGCCTGCTA TCTTGGTTGG CAGGAATCTC TGCGAAATCT GGCAAGGCTC
GTCGAACCCG AGATCAACCA ATAG
 
Protein sequence
MPNTVRLHRV LATSPEKLYR AFLEADALAK WLPPNGFACT VHHLEPKAGG TFKMSFRNFT 
TGESHAFGGE YVELFPGERL RYTDKFDDPN LPGEMQVTVT LKKVSVGTEL EIVQEGVPDV
IPLEACYLGW QESLRNLARL VEPEINQ