| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5147 |
|---|
| Symbol | |
|---|
| ID | 5319449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 99570 |
|---|
| End bp | 100376 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640776925 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001313857 |
|---|
| Protein GI | 150377262 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.988889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.586648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATAC TCTCGTTGAA CGCCTGGGGC GGGAGAATAC ATAATCCTCT GTTGAAATAT
CTCGGCAGCA CAAAGGCCGA CATCCTCTGT CTGCAGGAGG TCGTGCGCAC GTCCGGCCAG
CCGCATGGCT GGCTGACCTA TCGCGATGGT GACCTGCGCC TGCCGCAGCG CTCGAACCTT
TTCGACGAAA TCCGCGCGTT ACTACCCGCG CACCGCGCGC AGTTCTTTCC CGTCGCACGC
GGTCTGCTCC ATGACGATTA CGGCCGCGAG ATCTGGTCCG AATTCGGCTT GGCGACCTTC
GTTCGGGAGA GCTACGCGAC AATCGGCGAA GCGCTCGGTT TCGTGCACGG CGCCTTCACG
CCAGACAGCT GGGGTGAGCA TCCGCGCGCA CGAAATGCAC ATTGCGTCCG GGTTTTTGAT
CCGGACAGCG GGCTCTACGC CACAATCGCT CAGATGCACG GACTGCGCGA TCCCGCGGGC
AAGGGCGACA CGCCTGCACG AGCGGAGCAG TCAATGCGCC TGGTGAAGCT GATCGAGAGC
GTCTGGCCGG GCGACGAGCG GCTCGTGGTT TGCGGCGACT TCAACCTGCT GCCGCAGAGT
TCGACATTCG CGCGGCTCGC AACCTTAGGC CTGTCGGATC TCGTCACCGG CCGCGGCTAC
ACCGACACGC GAACTTCTTT CTACGAGAAG GAAGGGCGCT TTGCCGACTA CATGCTGGTG
AACGATCGCG TCGACGTGGT CGGCTTCGAA GTCGTGGCCG ACCCAGAAGT GTCGGATCAT
CGTCCGCTGC TACTGAAGTT GCGGTAA
|
|---|
| Protein sequence | MRILSLNAWG GRIHNPLLKY LGSTKADILC LQEVVRTSGQ PHGWLTYRDG DLRLPQRSNL
FDEIRALLPA HRAQFFPVAR GLLHDDYGRE IWSEFGLATF VRESYATIGE ALGFVHGAFT
PDSWGEHPRA RNAHCVRVFD PDSGLYATIA QMHGLRDPAG KGDTPARAEQ SMRLVKLIES
VWPGDERLVV CGDFNLLPQS STFARLATLG LSDLVTGRGY TDTRTSFYEK EGRFADYMLV
NDRVDVVGFE VVADPEVSDH RPLLLKLR
|
|---|
| |