Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5139 |
Symbol | |
ID | 5319441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 92998 |
End bp | 93480 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776917 |
Product | transcription elongation factor regulatory protein |
Protein accession | YP_001313849 |
Protein GI | 150377254 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.276669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.571454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGTTG CCTTCGTCAA GGAAGAAAGT GCTGAGGCTG CCTCGGAAAC ATTGCTGCCT GACCGGCCGA TTTCACCTCA TCCGAACCTT GTCACGGAAG AGGGGCTGAA GGCTCTGGAA TCGCAGCTTA AGCAGGCGCG CGAGGCTTAC GATGCCACGA GCACCATCGA GGACGTGAAT GAACGGCGGC GGCAAGCTGC AAACCCGTTG CGTGATATGC GCTACTTCGC CGAAAGGGTT CGAACGGCTC AGCTCGTTCC TGGGCCGGTT TCGTTCGACG CCGTAGCCTT CGGCAGCACG GTGACGTTCA GCCGCGATGA CGGACGCGTG CAAAGCTATC GGATCGTGGG CGAGGACGAA GCCGATCCCA GGTCGGGGTC GATCTCCTAT GCTTCCCCGG TAGCAAGGGC TCTCATGGGC AAGGCCGTCG GCGACGTCGT GAGCGTAGGC GATCAGGAAC TCGAAGTGCT CGCGATCGCG TAG
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Protein sequence | MSVAFVKEES AEAASETLLP DRPISPHPNL VTEEGLKALE SQLKQAREAY DATSTIEDVN ERRRQAANPL RDMRYFAERV RTAQLVPGPV SFDAVAFGST VTFSRDDGRV QSYRIVGEDE ADPRSGSISY ASPVARALMG KAVGDVVSVG DQELEVLAIA
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