Gene Smed_5139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5139 
Symbol 
ID5319441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp92998 
End bp93480 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID640776917 
Producttranscription elongation factor regulatory protein 
Protein accessionYP_001313849 
Protein GI150377254 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.276669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.571454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGTTG CCTTCGTCAA GGAAGAAAGT GCTGAGGCTG CCTCGGAAAC ATTGCTGCCT 
GACCGGCCGA TTTCACCTCA TCCGAACCTT GTCACGGAAG AGGGGCTGAA GGCTCTGGAA
TCGCAGCTTA AGCAGGCGCG CGAGGCTTAC GATGCCACGA GCACCATCGA GGACGTGAAT
GAACGGCGGC GGCAAGCTGC AAACCCGTTG CGTGATATGC GCTACTTCGC CGAAAGGGTT
CGAACGGCTC AGCTCGTTCC TGGGCCGGTT TCGTTCGACG CCGTAGCCTT CGGCAGCACG
GTGACGTTCA GCCGCGATGA CGGACGCGTG CAAAGCTATC GGATCGTGGG CGAGGACGAA
GCCGATCCCA GGTCGGGGTC GATCTCCTAT GCTTCCCCGG TAGCAAGGGC TCTCATGGGC
AAGGCCGTCG GCGACGTCGT GAGCGTAGGC GATCAGGAAC TCGAAGTGCT CGCGATCGCG
TAG
 
Protein sequence
MSVAFVKEES AEAASETLLP DRPISPHPNL VTEEGLKALE SQLKQAREAY DATSTIEDVN 
ERRRQAANPL RDMRYFAERV RTAQLVPGPV SFDAVAFGST VTFSRDDGRV QSYRIVGEDE
ADPRSGSISY ASPVARALMG KAVGDVVSVG DQELEVLAIA