| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5137 |
|---|
| Symbol | |
|---|
| ID | 5319439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 90008 |
|---|
| End bp | 91447 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640776915 |
|---|
| Product | malonyl-CoA decarboxylase |
|---|
| Protein accession | YP_001313847 |
|---|
| Protein GI | 150377252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.964153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG CATCATTCTT TAGCGACATG CTGCAGGGCA TTGCCGACCG CGGCCGGCGC
TTTTTATCGC TCGGTCCCGC CCGTAATGGC GAAGCCGATG CGGTCGGCAC CATGCAGGCG
CTATGCGAGA CCCTGCTGTC GAGCCGCGGC GAAGCTTCAG GCATGGCGTT GGCCAAGAAT
ATTCTGGATC GCTGGCAAGG CTTCGATCCG GAAAAGCGGC GCGATTTCAT GATCGCGCTG
CTCTCGCACT TCGGGCCTGA TATCGAACGG TTGGAGCGGG CGATCGACTC CTACCGCGCC
GATCCGACGC CGAAGGCGCT GCATGAAATG AGCATGGCGG CAGAACCGCG TCGCCAGGAG
CTGATCCGCA GACTGAATCT TGCCCCTAAC GGCATCGCGA CGCTCGTCCG CATGCGGGAG
GACCTCCTCG AACTCAAAGC CCGCAACCCC GATCTGGAGG CGGTCGACAC AGACTTCGCT
CATCTCTTCG GATCCTGGTT CAATCGGGGC TTTCTCGTGC TGCGGCCGAT CAGCTGGTCG
ACGCCGGCCG ATATACTGGA GAAGATCATT CGATACGAAG CCGTCCACTA TATCGGCGGC
TGGGACGAGC TGCGCCGCCG GCTTGCCCCG GAGGACCGCC GTTGCTTCGC CTTTTTCCAC
CCACAGCTCG CCGATGACCC GTTGATCTTC GTTGAAGTGG CGCTGACACG CGAAATGCCT
TCGAACATAG CGGACCTTTT GAAGGAGGAT CGCGCCCCGA TCCGCGCGGC CGACGCGACG
ACGGCGGTCT TCTACTCCAT TTCGAACTGC CAGGAGGGCC TCAGGGGCAT TTCCTTCGGC
AATTTCCTGA TCAAACAAGT GGTTGAGGAT CTGCGGCGCG ATCTTCCCCG CCTCGACACT
TTCGCGACGC TGTCGCCGGT GCCGGGATTT GCCGATTGGT TGTCGCGTGA ACGGCGGGCA
GAAGCGTCCG ACGCCCTCTC GCAGGCCGAC CGGGGCAAGC TCGCTCTGCT CGACGAACCG
GATTGGGCCG ATCAACCCGA GATCGTGGCA AGCATTCAGC CAAACCTGTC GGCTGCGGCT
GGCTGGTATT TCCTCAGAGC CCGCAACAGC TCCGGCAAGG TTGCGGATCC TGTAGCGCGG
TTCCACCTCG GCAACGGCGC GCGGCTCGAA CGCATAAATT TCCTGGGCGA CCGTTCCGAA
CGGGCGATGC GCCAGGCCCA CGGGCTCATG GTCAACTATC TCTACAAGCT CGATGACATC
GAGACCAACC ACGAAGCCTT TGCCACGCGC GGCGAGGTGG TCGCCGCACC CGCCATTCGC
CGCCTGGTTC CCGCAGATAG GAGTCCACGC AGCCTCGTTC CGGTTCCCGA CATCCTTTCC
CCGGATGCCC GGTCGAGTGA TGCACCGGGG CGGAAAGGCA ATAAGGAGTT CACTTCATGA
|
|---|
| Protein sequence | MSTASFFSDM LQGIADRGRR FLSLGPARNG EADAVGTMQA LCETLLSSRG EASGMALAKN
ILDRWQGFDP EKRRDFMIAL LSHFGPDIER LERAIDSYRA DPTPKALHEM SMAAEPRRQE
LIRRLNLAPN GIATLVRMRE DLLELKARNP DLEAVDTDFA HLFGSWFNRG FLVLRPISWS
TPADILEKII RYEAVHYIGG WDELRRRLAP EDRRCFAFFH PQLADDPLIF VEVALTREMP
SNIADLLKED RAPIRAADAT TAVFYSISNC QEGLRGISFG NFLIKQVVED LRRDLPRLDT
FATLSPVPGF ADWLSRERRA EASDALSQAD RGKLALLDEP DWADQPEIVA SIQPNLSAAA
GWYFLRARNS SGKVADPVAR FHLGNGARLE RINFLGDRSE RAMRQAHGLM VNYLYKLDDI
ETNHEAFATR GEVVAAPAIR RLVPADRSPR SLVPVPDILS PDARSSDAPG RKGNKEFTS
|
|---|
| |