| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5135 |
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| Symbol | |
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| ID | 5319437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 88129 |
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| End bp | 88698 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776913 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001313845 |
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| Protein GI | 150377250 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.621733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAGG CCTATTCACA GGCTGTCGGC AATGCTTCGC GAGGCCTCGC GGTCGTTGCG
ACGGCTCTGC TCATCGCGGC AATGCTCGTC GTCTGCCAGA TGATCATGCA GCGCTATATA
TTTCGCCAGG CGACGATCTG GCAGACGGAC TTCGTCGTAT TTTCCGCCAC GGCAGCCATG
TTCCTCGGCG CGCCATACGT ATTGCTCAAG GGCGGCCATG TGGGCATCGA CGTCGTGGAG
ATGGTGGTCG GCGACCGGGT GCGCTACGTT CTGCGCATCA TCGGAAGCCT GCTCGGTCTC
CTGTTCTGCT TCGTCATGCT GATCGCAACA TGGATTCAGT TCCATGACGC TTGGGCGGGC
AACTGGAAGC ACGCAAGCGT TTGGGCGCCG CCACTTTGGG TGCCGCTGTC CGCCCTGCCC
GTCAGCTTTG CCATGCTCTG CCTGCAATAT GTCGCGCAGA TTCTGACGCT TTTAACCGCC
CCCACAGCGC CGGCGGCCAC TGGTCATGGC GCGGCCCAAG CTGGTTCGGC TCCTGAAGCC
GGCCTTCCTC CACAGGAGAT CATCCAGTGA
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| Protein sequence | MLKAYSQAVG NASRGLAVVA TALLIAAMLV VCQMIMQRYI FRQATIWQTD FVVFSATAAM
FLGAPYVLLK GGHVGIDVVE MVVGDRVRYV LRIIGSLLGL LFCFVMLIAT WIQFHDAWAG
NWKHASVWAP PLWVPLSALP VSFAMLCLQY VAQILTLLTA PTAPAATGHG AAQAGSAPEA
GLPPQEIIQ
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