| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5134 |
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| Symbol | |
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| ID | 5319436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 87054 |
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| End bp | 88058 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640776912 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001313844 |
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| Protein GI | 150377249 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.67454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTT TTCGACGGAA GTTGACGACT TCCGCAGTCG CGGCGACCTG GAGCTTGATC
GCATCGACGG CGGGCGCCCA GACCGTGCTC AAGGCATCGC ACCAGTTTCC CGGCGGGAAG
GGTGACATTC GCGACGAGAT GGTGCAGTTG ATCGCCCGCG AGGTCGCCGC CGCCAATGTC
GGCCTCGAGA TCCAGGTTTT CCCAGGTTCA TCGCTGTACA AGCCGAATGA TCAGTGGAAT
GCGGTCACAC GTGGCCTGCT TGATATGACT TCGTTTCCGC TGGACTACGC TTCGGGCCGC
CATCCGGAAT TCTCCGCAAC GCTCATGCCC GGCCTTGTTG GCAATTTCGA TCGCGCGATG
CGGCTGAACG ATTCGGAGTT CATGGGAGAC ATAAAGAAGG TCATCGAAGA TGCCGGCGCT
TTGGTGATCG CCGATGCGTG GCTCTCCGGT GCATTCGCTT CGAAGAAGAG TTGCATCACA
TCTCCCGACA CCATCAAGGG ACAGGTGATC CGCGCCGCCG GGCCGGCCTT CGAGGAGATG
CTTGTGGAAG CCGGCGCCTC GATTTCATCC ATGCCTTCGT CGGAAATCTA CACCGGCATG
CAAACGGGCG TTTTGGATGC CGCGAATACA TCGTCGGCGA GTTTCGTGTC CTATCGACTG
TTCGAACAGG CAAAGTGCCT GACGGCTCCG GGAGAAAATG CCCTCTGGTT CATGTACGAA
CCGGTGCTGG TCTCCAAGCG CGTCTTCGAC GGCCTGACGG AAGAGCAGCA AAAGGCGATG
CTCGCTGCAG GCGAGAAAGC AGAGGCCTAC TTCAACGAAG AGGTCCGCAA GGGCGATCAG
GTCATGATCG ATACCTACAA GAAGGCAGGC GTCGAAGTCG TCGAGATGTC GAAGGAGGAT
TACGATGCCT GGCTCGCGCT TGCCAAGAAG TCTTCCTACA AGAACTTTGC CGCCAACGTC
ACCGACGGCG ACAAGCTGAT CGAAAAGGCG TTGGCCGTGA AGTAA
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| Protein sequence | MSSFRRKLTT SAVAATWSLI ASTAGAQTVL KASHQFPGGK GDIRDEMVQL IAREVAAANV
GLEIQVFPGS SLYKPNDQWN AVTRGLLDMT SFPLDYASGR HPEFSATLMP GLVGNFDRAM
RLNDSEFMGD IKKVIEDAGA LVIADAWLSG AFASKKSCIT SPDTIKGQVI RAAGPAFEEM
LVEAGASISS MPSSEIYTGM QTGVLDAANT SSASFVSYRL FEQAKCLTAP GENALWFMYE
PVLVSKRVFD GLTEEQQKAM LAAGEKAEAY FNEEVRKGDQ VMIDTYKKAG VEVVEMSKED
YDAWLALAKK SSYKNFAANV TDGDKLIEKA LAVK
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