Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5123 |
Symbol | |
ID | 5319425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 77596 |
End bp | 77763 |
Gene Length | 168 bp |
Protein Length | 55 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640776901 |
Product | Flp/Fap pilin component |
Protein accession | YP_001313833 |
Protein GI | 150377238 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3847] Flp pilus assembly protein, pilin Flp |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0326494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC TTCTCGTCCG TTTTGCTCGC AATGAATCCG GCGCCACCGC CATTGAATAC GGCCTGATCG CCGGCCTGAT TTCTGTCGTG ATCATTGCCG TGATGGCGAC CGTCGGCACC GGCCTGACCA CCAGATTCAC GGCTATCGGA ACGGCTCTCA CCGGCTGA
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Protein sequence | MKNLLVRFAR NESGATAIEY GLIAGLISVV IIAVMATVGT GLTTRFTAIG TALTG
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