Gene Smed_5119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5119 
Symbol 
ID5319421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp72801 
End bp73832 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content62% 
IMG OID640776897 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_001313829 
Protein GI150377234 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.481615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0439292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGTA TTCTTCTCGT CGCATCCACA CACGAAGTCG AAGAGCTCGT AAAGAAGGCG 
ATCGAGAGCG ACGCCTCCGC AGAGCTCTTG CTGACCGCGA GAAGCGGGAA AGACGCCGTG
AGAATGACCG GCGAACTCTT GCCGGACATC GTCGCCGTGG AACTCTGCCC CTCCGGCGAT
GATAGCGCTA AAACGGTCAG GGAAATAATG ATCTCCGCAC CTACGCCAGT CGTGATGCTC
GCCTCCCGGG ACGGCTCGCA ACTCGGAACC GCTTCGGCAC AAGCGCTCGA AGCGGGCGCT
CTCGCGGTCA TACCCGCGCC GGGGGCCCAC GGCACGGCTC TCGATGCCCC AGCGATCGAA
AAGTTTCTCT CCACGGTCAA GGCCATGTCC CAGGTCAAAA TCGTGCGGCA ATGGCGCCGG
AAGGATCACG GATCCAAAGA CCGAACCGCG CCCGCGGCCA GCGCGGCGAT CGGAATCGTC
GCAATCGCGG CCTCTACCGG CGGCCCGGCT GCGCTCCGTT CGATACTGAA GGAAATTTCA
GCCGATTTCC CGGTTCCCAT TCTCATCGTC CAGCACATGT CGAACGGCTT TATCGATGGC
GTTGCCGCCT CTCTTGACGC GACCGTTCCA CCTACAGTGA AGGTCGCCAG GAATGGAGAG
CTTCTTAGAC CTGGCACGGT CTACTTCGCG CCGGACAATT ATCAGCTCGG CGTCTCCGGC
AGATCGCGCC TACGCATCTC GGACGATGCT CCGGTCAACG GCTTCAAACC CTCTGGATCC
TACCTCTTCG GCTCGATTGC ACGTGTTTTC AAAGGAGAAT CCCTTGCGGT CATCCTGACG
GGAATGGGCG ATGACGGAAC CGAGGGGCTT CGGTCACTGC GTGTGGCGGG CGGCAAGGCG
ATCGCCCAGG ACGAGAAGAG CTCGGTCGTC TTCGGCATGC CGAAGTCGGC GATCGGCGCC
GGCCTCGTAG ACCTTGTGCT GCCACTGGAA AGCATCGCCG AGAACATTAC GGCCATCGCC
CGGGGTCGCT AG
 
Protein sequence
MVRILLVAST HEVEELVKKA IESDASAELL LTARSGKDAV RMTGELLPDI VAVELCPSGD 
DSAKTVREIM ISAPTPVVML ASRDGSQLGT ASAQALEAGA LAVIPAPGAH GTALDAPAIE
KFLSTVKAMS QVKIVRQWRR KDHGSKDRTA PAASAAIGIV AIAASTGGPA ALRSILKEIS
ADFPVPILIV QHMSNGFIDG VAASLDATVP PTVKVARNGE LLRPGTVYFA PDNYQLGVSG
RSRLRISDDA PVNGFKPSGS YLFGSIARVF KGESLAVILT GMGDDGTEGL RSLRVAGGKA
IAQDEKSSVV FGMPKSAIGA GLVDLVLPLE SIAENITAIA RGR