| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5111 |
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| Symbol | |
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| ID | 5319413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 58959 |
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| End bp | 59846 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776889 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313821 |
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| Protein GI | 150377226 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.176573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0206941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGC CGCCGCCATT GAACTACATT CGCTCGTTCG AGTGCTCCGC CCGGCATCTC
AGTTTCACCG AGGCCGCCGA GGAACTGGGC TATACCCAGG CCGCCATCAG CAATCACGTG
CGCGCGCTCG AGCAATATCT CGGCCGTCAG CTCTTTATCC GTTATCCGCG CAGCCTCAAG
CTGACCGAGA TGGGGGAAGC GTTTCTTCCC ACACTGCGCC AGGCATTGAA CCAGATCGAT
TTCGCCACGG AAGCGGTGCT TGCGTCGGCG CGCAACAAGA CCGTCGTCAT TTCCTGCCCG
ACCAGCCTTG CTGAAAACTG GCTGGCAAAG TGCGTCGCCG GGTTCAGCAG GAAACATCCC
GACGTCGAAA TTCTGCTGCA CGGCACGATA TGGGAGGATT CGACCGAGCA AATCGCCGAT
ATTCTCATTT CGATCCGCCG CTTCGACAAC ATGCCGGCAA ACGGTATGCA ATTGTGGAAC
GACAAGCTTG TACTTCTGTG TGCGCCGCAA CTCGTTCATG GGCAGAACCC GCTGAAGACG
CCGGCTGACG TTCTGAATTC CAACTGGATA GCAGTGCACG GCCGGCAGGA GTTCTGGCAG
GAGATGGCCG ATGCGCTTGG CATCGACGCA TCCGCTAACG AAAAGCGGCT TTCGACCAAC
TCCACCAACA TAGCACTGGA AATGGCGGCG AGCGGCGCCG GCTGCGTCGT CACCACCCAT
TCGCTCGCGC GAACCTATGT GGATCGCGGC CTGCTCGTGG AGCCGTTCAA TATCCGGCCC
AGGAGCGCCT GGAACTATTA TCTCGCCGAC GGGCAGGCTT CGAAAGGAAC GACGGTCTCG
AAGGTGCGTG ACTGGATCAT CGCCGAGGCT CAGAAGGTGA CCGGCTGA
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| Protein sequence | MKPPPPLNYI RSFECSARHL SFTEAAEELG YTQAAISNHV RALEQYLGRQ LFIRYPRSLK
LTEMGEAFLP TLRQALNQID FATEAVLASA RNKTVVISCP TSLAENWLAK CVAGFSRKHP
DVEILLHGTI WEDSTEQIAD ILISIRRFDN MPANGMQLWN DKLVLLCAPQ LVHGQNPLKT
PADVLNSNWI AVHGRQEFWQ EMADALGIDA SANEKRLSTN STNIALEMAA SGAGCVVTTH
SLARTYVDRG LLVEPFNIRP RSAWNYYLAD GQASKGTTVS KVRDWIIAEA QKVTG
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