| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5107 |
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| Symbol | |
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| ID | 5319409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 54115 |
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| End bp | 54795 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776885 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001313817 |
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| Protein GI | 150377222 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.321359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0633461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAC CGTTACGGAT CGGCCGCGCA AAATTTGCCT GCCTTTTCAT CGATCTGCAG
GAGGAGCATC GCCACGACGA GCGCTATCTC GTGGAAGGCT ACGATGCGGT GCTCGGCAAT
GCCGCACGCC TCCAGGCGGC GGCCCGGCGT AGCGATATTC CCGTTTTTCA CTGCGCCTAT
GTCGTCGATC CCGCCGACGG TCTTCGCCCG TTCCATCCGA TCGGGCCCGA CGGTCGTTCC
GCCTTCAGCG ACAAGGATGA CCCGCTTACG GCGATCTGCC CGGAGGTCGC TCCGCGACCT
TCGGAGCGGT TGCTTGTCAA GAACGAAGCA AGCGCCTTCG GCAAAAGTCC GCTGATCGGC
GAATTGCGCG AGGCGCGCGT GGAATGGCTG GCGATCGCCG GCGTCTGGAC CGAGGCCTGC
GTCGATGCCA CCGTCAAGGA CGCGATCAAC CTGGGCCTGC ACGTCCTCCT CGTCAAGGAC
GCCTGCGGTA GCGGCGGCAC GGCGATGCAT CAGACAGGCA TTCTGAACCT GGCGAACCGC
CTCTATGGCG GTGCGGTCGT CGACACGGCG TCCGCATGCG CCCTTCTGGA AGGAGACATG
GTCGAAGCAT GGCAGATCGA GGGATCCGTG CCGCTGCGAT ATACTTTCGA GAACGCCGCC
AAATTATATG GGGAACTCTA G
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| Protein sequence | MRKPLRIGRA KFACLFIDLQ EEHRHDERYL VEGYDAVLGN AARLQAAARR SDIPVFHCAY
VVDPADGLRP FHPIGPDGRS AFSDKDDPLT AICPEVAPRP SERLLVKNEA SAFGKSPLIG
ELREARVEWL AIAGVWTEAC VDATVKDAIN LGLHVLLVKD ACGSGGTAMH QTGILNLANR
LYGGAVVDTA SACALLEGDM VEAWQIEGSV PLRYTFENAA KLYGEL
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