| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5098 |
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| Symbol | |
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| ID | 5319400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 46329 |
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| End bp | 47372 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776876 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001313808 |
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| Protein GI | 150377213 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.109281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.521536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCC GGATGATCGC TCCATGTTTC ATGGACGACA CGCTCGAATG CCTTAGGCGC
CATGGAGTCG ACGCCGGGCC CCTTCTTGCG CAAGTCGGCC TCCCGCCAGT CATCACCGGC
CCTGTGCCGG CCGAGCAATA CGGCGCATTG TGGCATGCGG TGGCTCAGGT CATGGATGAC
GAGTTTTTCG GCGAAGGCGC ACGGCCGATG CGCGCCGGCA GCTTCGCATT GCTGTGCCAT
GCCATTCTTT CGACGGTGAC CCTCGAACAC GCGCTGCGGC GAGCCCTGCG CTTTCTAAGG
ATCGTCCTCG ACGATCCCCA TGGCGAACTG GTCGTCGAGG ACGGACTGGC GCAGATCGTC
CTCGAGGATG CCGGCGCGAC ACGCTCCGCC TTTGCCTACC GCACCTTCTG GATCATCCTG
CATGGCGTCA ATTGCTGGCT GATCGGACGC CGGTTACCGA TCCGCTGGGT CGACTTCCGC
TGCAGCGCGC CGCCGGCCGG AACCGATTAC CGGCTCTTCT TCGGTGCGCC CGTCCGCTTC
GACCAGCCCC GGACGCGGCT CGTCTTCGAT GCCGAGTACC TGAAACTGCC GCCCATTCGA
GACGAGCGGG CGCTGAAACA CTTCCTCCGG CATGCGCCGG CGAACATTCT CGTGCGCTAT
CGCCACGATG CGGGCTTGTC CACGGCAATA CGCAGGCGGC TCCAGGCCTT GGATCCGTCC
GCCTGGCCCG GTTTCGAGAC GCTCGCGGCG CGGATGCGGA TTGCAGCGCC GACCCTTCGC
CGGCGATTGA AGCAGGAAGG TCAGACCTAC CGATCAATCA AGGAAGACCT GCGCCGGACA
CTTGCCATGG AAGCGCTTGC CGAGCGCGGA CAGAACGTGG CGCAGCTCGC CGTCGAACTC
GGCTTTTCCG AACCAAGCGC CTTTCATCGC GCATTCCGCA AATGGACGGG GAAATCCCCG
GCGCAATTCC GGCGCAGTGC CAGCGAAACA GGTCTGGCGG AAAGCGGCTC GTTGAAGAAA
CGCACTCAAC TCCAGGAGAG CTGA
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| Protein sequence | MERRMIAPCF MDDTLECLRR HGVDAGPLLA QVGLPPVITG PVPAEQYGAL WHAVAQVMDD
EFFGEGARPM RAGSFALLCH AILSTVTLEH ALRRALRFLR IVLDDPHGEL VVEDGLAQIV
LEDAGATRSA FAYRTFWIIL HGVNCWLIGR RLPIRWVDFR CSAPPAGTDY RLFFGAPVRF
DQPRTRLVFD AEYLKLPPIR DERALKHFLR HAPANILVRY RHDAGLSTAI RRRLQALDPS
AWPGFETLAA RMRIAAPTLR RRLKQEGQTY RSIKEDLRRT LAMEALAERG QNVAQLAVEL
GFSEPSAFHR AFRKWTGKSP AQFRRSASET GLAESGSLKK RTQLQES
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