| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5092 |
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| Symbol | |
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| ID | 5319394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 41190 |
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| End bp | 41897 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640776871 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001313803 |
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| Protein GI | 150377208 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA CCGTAGACAG TCTCGCGGAG GCGGTCGCCG AGATCGGCGA CGGCGCAACC
GTTATGATCG GGGGCTTCGG TGGTTCCGGA GCGCCTATAG AACTCATCCA CGCCTTGATT
GATCTGGGCC CGAACGACCT GACCATCATC AATAACAACG CAGGCAACGG CCGAATCGGT
ATTGCCGCGA TGATCGATGC CGGGATGGTG CGGAAGATGA TTTGCTCATT CCCGCGTTCC
TCCGATCCGC GAGCGTTCAC TGAGCGTTAT CTGAAAGGAT GTATCGAGCT TGAATTGGTA
CCCCAAGGGA CTCTTGCAGA GCGGATACGC GCCGGCGGCG CTGGTATCCC CGCTTTCTAC
ACTCCGACTG CGTTCGGAAC CGAGCTCGCC GCGGGCAAGC CAACGGCGGA ATTCGACGGT
CGTACCTATG TGCAGGAAAG GTGGCTCAAG GCTGACTTTG CTATTGTCAA AGCGCATGTC
GGCGACACGC ATGGCAACCT GACCTTCAAC AAGGCTGCAC GCAACTTCAA CCCGCTGATG
TGCATGGCGG CCAGGACGAC CATCGTCCAG GTCTCCAGAA TCGTGCCTGC CGGAGTTATC
AATCCCGAGC ACGTCATCAC TCCGGGCATC TTCGTGAACA AGGTCGTCGA AGTCCCCTTC
CCGCAGCAGG AAGAAGAACT GGTACGAGCA GGAGTGAGCT ACCCATGA
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| Protein sequence | MDKTVDSLAE AVAEIGDGAT VMIGGFGGSG APIELIHALI DLGPNDLTII NNNAGNGRIG
IAAMIDAGMV RKMICSFPRS SDPRAFTERY LKGCIELELV PQGTLAERIR AGGAGIPAFY
TPTAFGTELA AGKPTAEFDG RTYVQERWLK ADFAIVKAHV GDTHGNLTFN KAARNFNPLM
CMAARTTIVQ VSRIVPAGVI NPEHVITPGI FVNKVVEVPF PQQEEELVRA GVSYP
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