Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5090 |
Symbol | |
ID | 5319392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 39301 |
End bp | 40158 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776869 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001313801 |
Protein GI | 150377206 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCC CGCTCGACCT TCGCCTGCTG ATCACCTTCG TACATGCCGC CCACTCCGGA TCGCTGAGCG CGACGGCAGT GCAGGTCGGG CGTACGCAAT CGGCGGTCAC GATGCAGATG CAGCGGCTCG AGGAAATGCT TGGCCACAGC CTGCTGCACC GCAGCGGGAG TGGGGTTCGG CTGACCGGCA GCGGCGAGCG CTTTCTCGTT TATGCCGAGC GAATTCTGAA AATGCATGAC GAGGCGGTGT CGGCCTTTTC CGATAAGGGC CTGCACGGCT CCATGGTCTT CGGCAGCCCG GAAGACTATC TGATATCCTT CTTCCCGATG CTTCTGAGAA GCTTCGGTTC GAAATATCCC GACGTCGAAA TCAAGGTCGT TTCCGCGCCG ACGGTGGAAT TGCGAACGCT CCTTCAATCG CGCAAGGTCG ATCTGGCGCT TGTTTCGACC CCCAATCTGA ACGACGTCGA AAACATCGTC AGAACCGAAC CGCTCGTCTG GGTCGGAAGC AAGCCGACGC TGGAACTGCA CGATTTCGGC GACGCGGTTC CCCTGGCATT GCCGGCCTCG AACGCCATGG ACCATCGCGC GGCATTGCAG GCGATGGGCG GCGCCGGCCT TCGCTACAAG ATAGCCTATG CAAGCAACAG TCTCGCAGGT CTGATCGGCC TTGCCCGTTC CGGGCTCGCC ATCAGCGTCA TGACGCAGGA AGCCGTTCCG CCGGACCTAC ACGTTCTGAA CGCGCCGCTT CCCCAACTGC CGCACCTGGG CATAATGATC GCCTGCGCGG ACGCCGACCA ATCTCCCGCC GTCGCAGCCT TTGCCGATCA CATCCGGTCG GTCCTGCCGT CGCTTTAG
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Protein sequence | MLGPLDLRLL ITFVHAAHSG SLSATAVQVG RTQSAVTMQM QRLEEMLGHS LLHRSGSGVR LTGSGERFLV YAERILKMHD EAVSAFSDKG LHGSMVFGSP EDYLISFFPM LLRSFGSKYP DVEIKVVSAP TVELRTLLQS RKVDLALVST PNLNDVENIV RTEPLVWVGS KPTLELHDFG DAVPLALPAS NAMDHRAALQ AMGGAGLRYK IAYASNSLAG LIGLARSGLA ISVMTQEAVP PDLHVLNAPL PQLPHLGIMI ACADADQSPA VAAFADHIRS VLPSL
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