| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5077 |
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| Symbol | |
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| ID | 5319379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 23806 |
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| End bp | 25455 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776857 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313789 |
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| Protein GI | 150377194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.704503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGT CGGACAAGCC AATACTGCGT ATCGACGGCC TGACGGTGGA CTTCCTGTCC
GAAGGTGATC CGGTGCGCGC CGTGGACAAT GTCTCGTTCG ATGTCTGCCC GGGCGAGACG
CTCGTCATCC TCGGCGAGAG CGGATCGGGC AAGAGCGTCA GCACCGGTAC GGTGATGGGG
CTGATCGATT GCCCCCCGGG CGACATCGTT TCGGGCACCC TGGTATTCGA CGGGACCGAT
CTTTCCCGCC TCGACAACGA AGGCAGGCGT GAACTGAACG GTCGCCGTAT CGCCATGATC
TTCCAGGACC CGCTCGCCTA TCTCAATCCG GTCTATACTG TCGGCCGGCA GATCGCCGAG
GTTTTCGAAA GCCATGGCGC AGGCGAGGGC GGGGCGATGC GCGGAAGAGT CGTGCGCCTG
CTGGAACGGG TTGGGATCCC GGAAGCGGAA ACGCGGGTCG ATTACTATCC GCACCAGTTC
TCCGGCGGAC AGAGGCAACG CGTGATGATC GCGATGGCGA TTGCGCTCGA ACCGGACATT
CTGATCGCCG ACGAGCCGAC CACCGCGCTC GACGTCAGTG TCCAGGCGCA GATCCTCGAC
CTTCTGCGGG ACCTGCAGCG CGAAACCGGA ATGGCGCTGA TCATGATCAC CCACGATCTG
GAGGTCGCCG CGGCCATGGC GGACCGGATC ATCGTGATGA ATGCCGGCAA GGTGGTGGAG
AGCGGCAGGG CCGAGGATGT CTTCACCAAT CCGCGCCACA GCTATACCCG CCGGCTGATG
TCGGCGGTGC CTCATGGCGA CCCAAAGAAG CGAAGCCGGC CTGTCGAACA GGAGGTCCTG
CTGCAGGTCG CCCATCTGAG CAAGCACTAT AAGCTCGGCT CCGGCCCGTT TGCGCCCAAA
CGCGAGTTCA AGGCAGTGGA CGATGTGAGC TTTACGCTTC GTCGCGGCGA AACGGTCGGC
ATCGTCGGAG AGTCCGGTTC GGGTAAATCC AGCATTGCGC GCATGCTGCT GAGGCTCAAC
GAGCCGACAT CGGGCTCGGC GCTCTTTGCC GGCGAGGACA TCTTCAAGCT CGAGGGCAGG
GCGCTCAACG GATTTCGCCG GAAAGTGCAG ATGGTGTTTC AGGATCCGTT CGGCTCGATG
AACCCGCGCA TGAACGTCCG TTCGATCATT TCAGAACCCT GGGCGATCCA CCGGGATATC
CTGCCGCGCC AACGCTGGAA CGAACGGGTC GTTGAACTGC TGGAGCTTGT CGGCCTGAAG
CCGGAGCATG CGGAGCGCTA TCCGCATCAA TTTTCGGGCG GGCAGCGGCA ACGCATCGCC
ATTGCCCGGG CGCTCGCCAG CGAACCCGAG CTCATCGTCT GCGACGAAGC GGTCTCGGCG
CTCGACGTGT CGATCCAGAT GCAGGTCATC GAACTCCTGG CCGATCTCCG CCAGCGCCTC
GGCCTCTCCT ACATCTTCAT CACCCATGAT CTGCCCATCG TGCGTCAATT CGCAGACCGG
ATCCTGGTGA TGCAACGAGG CAAGATCGTC GAGGAGGGTG AGACGGAAGC TCTTTTCGTC
TCGCCTCGGC ACGAATACAC GCGAGCCCTG CTGAACGCCG TCCCCCAACC GAAATGGCTG
CAGCGCGATC CGACCCCGCT CGCGGGGTAG
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| Protein sequence | MTASDKPILR IDGLTVDFLS EGDPVRAVDN VSFDVCPGET LVILGESGSG KSVSTGTVMG
LIDCPPGDIV SGTLVFDGTD LSRLDNEGRR ELNGRRIAMI FQDPLAYLNP VYTVGRQIAE
VFESHGAGEG GAMRGRVVRL LERVGIPEAE TRVDYYPHQF SGGQRQRVMI AMAIALEPDI
LIADEPTTAL DVSVQAQILD LLRDLQRETG MALIMITHDL EVAAAMADRI IVMNAGKVVE
SGRAEDVFTN PRHSYTRRLM SAVPHGDPKK RSRPVEQEVL LQVAHLSKHY KLGSGPFAPK
REFKAVDDVS FTLRRGETVG IVGESGSGKS SIARMLLRLN EPTSGSALFA GEDIFKLEGR
ALNGFRRKVQ MVFQDPFGSM NPRMNVRSII SEPWAIHRDI LPRQRWNERV VELLELVGLK
PEHAERYPHQ FSGGQRQRIA IARALASEPE LIVCDEAVSA LDVSIQMQVI ELLADLRQRL
GLSYIFITHD LPIVRQFADR ILVMQRGKIV EEGETEALFV SPRHEYTRAL LNAVPQPKWL
QRDPTPLAG
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